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View Structure Prediction Details

Protein: FBpp0308241
Organism: Drosophila melanogaster
Length: 381 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0308241.

Description E-value Query
Range
Subject
Range
gi|114581861, gi... - gi|114581863|ref|XP_001152299.1| PREDICTED: chimerin (chimaerin) 1 isoform 10 [Pan troglodytes], gi|...
205.0 [0..33] [350..26]

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Predicted Domain #1
Region A:
Residues: [1-146]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTAGDMDHL ASVSFGDFET KSPEGDVSCY QNFRAQTEHV SLDISLGQKS DTLFAADQTP  60
   61 TPTRLIKNCD EVGLFEDLQH VNPFDIGFQQ AAERNVSGTP SRPEARPNDG ESLHTPQVYP 120
  121 VEAPTVVSVP SENQVPQSVS CGDMDV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [147-272]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DQLLATTVTS PSKASQDGPP PLQLIQPQVL TWVLPAQSVP ISIATVDCNR NRVKPTGAIH  60
   61 PFILPKPTAK ELNKTSKRPE PILVSCNPPN NEPSSASLTP TSQLPIKERL KAIIHSNNNR 120
  121 RSFSTP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [273-381]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PKAAKAKDRS RDEDCMERRR AAASRYRNKM RNEHKDLIKQ NAQLQQENQE LHERISRLEK  60
   61 ELQQHRSHSS LAGVVADQLR IPPSSIHLLI NVPNVLVPSS ASNASAAKK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 14.09691
Match: 1ci6A
Description: Atf4
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle