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View Structure Prediction Details

Protein: gukh-PC
Organism: Drosophila melanogaster
Length: 1044 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gukh-PC.

Description E-value Query
Range
Subject
Range
gukh-PB - The gene GUK-holder is referred to in FlyBase by the symbol Dmel\gukh (CG31043, FBgn0026239). It is ...
437.0 [0..1] [532..1]

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Predicted Domain #1
Region A:
Residues: [1-121]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPFVQRVVQP VNVAQATAAS LGHASGRFHC TPGKCRNNNC INKQSPDVEV PNGHGSPTSL  60
   61 TRVLVHQAPE DQPVPPAPAP MKKLKHHVEF LSTSPTRHQS QSLPNSRHPS QQRPALGRIA 120
  121 S

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [122-271]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 APQSPTAGSS KVVSGHEFDS ISNITLSNAL RQLASLVLIA SDIFDDLQRD LQAVGERAGR  60
   61 VQRKIAAVER RVCAYDPKTV TVPESDLLTF AQRKHHFETD KSFQQELFTG ETRPLSVRQL 120
  121 YTEAGKELPV ATGATATALA SLAHSQSLIP 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [272-517]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SRSISFNGEV LSSDHEVLQL NGSTDTEDHL LCVSDFGNAN RKLRTRIDAE IEIRLPAAIE  60
   61 DLRKWTSSEA LGDVTVTPDC MHHVDTSVST SLAIGENGIL TPALSPSVLS ADAVDALYAQ 120
  121 NLSQAADSSR HNHHTQALIP NDINKDVPLN HRLPSPEEQT KQIALKYPAE VISVNTSGKH 180
  181 FQRMCAARKS TSGGYAGGAT AGSSSSTSPE NAGQTEGNNL DDNVQTVSRR SRSRKVRGKR 240
  241 RNTIAG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [518-745]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IDQKEIQDAA NGLKRRKGAH TTFAPGPYVK ETESALHSAE SAAAAIASSQ DPSAASGAIS  60
   61 STKSAKLLLL TSGGLISGNR KVANVRPIVA KSPLSRNVSE MATYQATSYQ DQKQLLANRT 120
  121 NPFYETIAAP VANLMMPSPS GKSNSSTGST ATSSSSSASG QSGEEGYQRF SNIYEQVQPA 180
  181 PSTQPQEDAT ATPFQRSAPI YWTLQNRRSQ PRPQPAGNVT CRDDLYAT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [746-927]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PIRRADRLPR PVAAAAATAA EGNRSNISPI VPRNRSGAFL TSTPTRSGEG ERDSENTQLP  60
   61 PMKQPSRNWT DDAPERLNTC ADRIGQSKTT LMDFKKLLLA KSAKASPVQR KVSAVELLKK 120
  121 PAQATATPPV VKPSGPGQKV ASAGSKPTIN TSLKLLDLSG SPKTFANRRM LRQGQFGSPS 180
  181 KT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [928-1044]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FAPKMRGPVN MVAAAAAPPR TDIMSTTIPE ANSEEDHSNT SGGSRASSEA GETVPSSFDL  60
   61 KRNFFLQTEE NNFMRGELKP SFARSNGAAG GGSTEGVNKY VAAPVANPPL PSFETAL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle