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View Structure Prediction Details

Protein: CE39430
Organism: Caenorhabditis elegans
Length: 259 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE39430.

Description E-value Query
Range
Subject
Range
gi|75854184, gi|... - gi|75854184|ref|ZP_00761894.1| COG0288: Carbonic anhydrase [Vibrio sp. Ex25], gi|254230326|ref|ZP_04...
gi|91187816, gi|... - gi|91228633|ref|ZP_01262550.1| putative carbonic anhydrase [Vibrio alginolyticus 12G01], gi|91187816...
233.0 [0..1] [255..1]

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Predicted Domain #1
Region A:
Residues: [1-259]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGLERILNG VIRFRQTVRK DLVKQFERIR DNPHPTAVFF TCMDSRMLPA RITSSQVGDM  60
   61 FVVRNSGNMI PHANNYGPSG YEVSVTTEPA ALELAVKRGK INHVIVCGHS DCKAINTLYN 120
  121 LHKCPKSFDP ESPMDHWLRR HGFNSIRKLE KRLADKNAGP IEFVSDNPLF SFSAVIDPED 180
  181 KLNVEDKLSQ INTLQQLENV ASHGFLKEFL VSQTVDLHAM WFDIYTGEMH MFSKPNKQFV 240
  241 LVDESNVEEL IDEVEKHQT

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Detection Method: PSI-BLAST
Confidence: 57.522879
Match: 1i6oA
Description: beta-carbonic anhydrase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
carbonate dehydratase activity 2.96380803089124 bayes_pls_golite062009
catalytic activity 1.85658156053797 bayes_pls_golite062009
carbon-oxygen lyase activity 1.691366175135 bayes_pls_golite062009
hydro-lyase activity 1.65497918079842 bayes_pls_golite062009
lyase activity 1.62374861994341 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle