YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: alh-9
Organism: Caenorhabditis elegans
Length: 531 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for alh-9.

Description E-value Query
Range
Subject
Range
gi|52785994, gi|... - gi|52785994|ref|YP_091823.1| DhaS [Bacillus licheniformis ATCC 14580], gi|52348496|gb|AAU41130.1| Dh...
590.0 [0..19] [520..1]

Back

Predicted Domain #1
Region A:
Residues: [1-531]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRLLSSGMS AATLQTRMAS QLLINDSKYG FLKELGLTEN NAGVFHGKWA ASGQVVQSFA  60
   61 PANNSPIANV QNGNVQDYEI AISEAKKAYN DWCEVPAPRR GEIVRQIGDK LRTQLQNLGK 120
  121 LVSLEMGKIS AEGVGEVQEY VDICDYATGL SRSLEGKIFP SERPGHALLE QWNPLGVVGV 180
  181 ISAFNFPCAV YGWNNALALV TGNSVVWKPA PSTPLTAIAV TKLVEEVLVA NNVNPALCSL 240
  241 VCGEGDVGQA LVKDKRVNLV SFTGSSEIGK IVGQQVQARF GKLLLELGGN NAIIVNEDAD 300
  301 LNMVVPATVF AAVGTAGQRC TTTRRLIVHD KVYDQVLERL KKAYAQFESR IGCPLDSNTI 360
  361 IGPLHNQQAV GKYKASVAEA VASGGKIEYG GKVLERDGNF VLPTIVTGLK HDSPVVLRET 420
  421 FAPILYVLKF STLEEAIAIN NEVDQGLSSS LFTTNIQNVF KWMGPKGSDC GIVNVNIPTS 480
  481 GAEIGGAFGG EKETGGGRES GSDSWRQYMR RSTCTINYSK ELPLAQGIKF E

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 135.0
Match: 2j6lA
Description: No description for 2j6lA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle