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View Structure Prediction Details

Protein: gi|215697015, gi...
Organism: Oryza sativa Japonica Group
Length: 707 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|215697015, gi....

Description E-value Query
Range
Subject
Range
gi|92882107 - gi|92882107|gb|ABE86602.1| Fibronectin, type III-like fold [Medicago truncatula]
381.0 [0..58] [707..57]

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Predicted Domain #1
Region A:
Residues: [1-185]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSAGGDPP PPGLFAAALH ACSGASALEE HIHADDSNTI SDNTLEQLGF LDQESNDASV  60
   61 NTEKIQSSTP KCKSVEDIPI APAAKRCKNM DSKKLVPNSN NNSCLTGSQA PRKLPRKGDY 120
  121 PVQLRRNETF QDTKPPSTWI CKNAACKAVL TADNTFCKRC SCCICHLFDD NKDPSLWLVC 180
  181 SSETG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [186-298]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DRDCCESSCH IECALQHQKV GCVDLGQSIQ LDGNYCCAAC GKVIGILGFW KRQLMVAKDA  60
   61 RRVDILCSRI YLSHRLLDGT TRFKEFHKIV EDAKAKLETE VGPLDGTSSK MAR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 30.0
Match: 2nziA
Description: No description for 2nziA was found.

Predicted Domain #3
Region A:
Residues: [299-707]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GIVGRLPVAA DVQKLCSLAI DMADAWLKSN CKAETKQIDT LPAACRFRFE DITTSSLVVV  60
   61 LKEAASSQYH AIKGYKLWYW NSREQPSTRV PAIFPKDQRR ILVSNLQPCT EYAFRIISFT 120
  121 EYGDLGHSEC KCFTKSVEII HKNMEHGAEG CSSTAKRDSK SRNGWSSGFQ VHQLGKVLRK 180
  181 AWAEENGCPS EACKDEIEDS CCQSDSALHD KDQAAHVVSH ELDLNESSVP DLNAEVVMPT 240
  241 ESFRNENICS PGKNGLRKSN GSSDSDICAE GLVGEAPAME SRSQSRKQTS DLEQETYLEQ 300
  301 ETGADDSTLL ISPPKHFSRR LGQLDDNYEY CVKVIRWLEC SGHIEKDFRM KFLTWFSLRS 360
  361 TEQERRVVIT FIRTLADDPS SLAGQLLDSF EEIVSSKKPR TGFCSKLWH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 37.154902
Match: 2v5yA
Description: No description for 2v5yA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle