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View Structure Prediction Details

Protein: CE39237
Organism: Caenorhabditis elegans
Length: 154 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE39237.

Description E-value Query
Range
Subject
Range
gi|162319260 - gi|162319260|gb|AAI56104.1| DOT1-like, histone H3 methyltransferase (S. cerevisiae) [synthetic const...
gi|22001120, gi|... - gi|22094135|ref|NP_115871.1| DOT1-like, histone H3 methyltransferase [Homo sapiens], gi|22001120|gb|...
197.0 [0..11] [153..190]

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Predicted Domain #1
Region A:
Residues: [1-154]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLLPTLAQA VPKSFFQRQY KNTQCTLMCL NEIESIQELF FNLNDVETRS LKAYLVDRIN  60
   61 EIQTQATVIV VNNVRFSPEL KLELKEILSK CIDGTRIISS ESIVPRPRSQ SSTSRRIDDF 120
  121 VKITDERLLH LVENNTSWTG DKVPFYLTEI NRNK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 50.154902
Match: 1nw3A
Description: Catalytic, N-terminal domain of histone methyltransferase Dot1l
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle