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View Structure Prediction Details

Protein: fbxa-57
Organism: Caenorhabditis elegans
Length: 209 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for fbxa-57.

Description E-value Query
Range
Subject
Range
fbxa-40 - status:Predicted UniProt:Q968Z2 protein_id:AAK39347.2
183.0 [0..3] [209..54]

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Predicted Domain #1
Region A:
Residues: [1-97]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCYRLRARKV CRSLRSAVDK FGLRFDCIDL YLRKDEVEMN LSGTTSRYIT AANGNSNVIH  60
   61 NEQEKLIDRE DFADRALKDL KIVSKHARNI TIWNNTD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [98-209]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DRCDIVTTFI KIFKAEKCIH VKEIELWNFG FDEVLTILSW LDAKMLKKIE LVFIVSIDQF  60
   61 ERITLLEQWG NAEEFILWDS KIASAMIVHF FHFKCFTIDH TDEFPALSVY KI

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 22.958607
Match: PF01827.18
Description: No description for PF01827.18 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle