| Protein: | FBpp0293384, Oct... |
| Organism: | Drosophila melanogaster |
| Length: | 536 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0293384, Oct....
| Description | E-value | Query Range |
Subject Range |
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|
352.0 | [0..1] | [536..1] |
|
Region A: Residues: [1-129] |
1 11 21 31 41 51
| | | | | |
1 MLLCDGLGPE PPRQRHRNRT SAARIRKRPK CCCGDGGSGN QAEQPGGIVS NPISYGQSLT 60
61 TLARVTAAAL TTAAMLHTTN ALAATGSSSA SNSSTGGIAL PLGTATPATH ELNATQPFGG 120
121 SGLNFNESG
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [130-536] |
1 11 21 31 41 51
| | | | | |
1 AGLSDHHHHQ QHNPDEDWLD NIVWVFKAFV MLLIIIAAIC GNLLVIISVM RVRKLRVITN 60
61 YFVVSLAMAD IMVAIMAMTF NFSVQVTGRW NFSPFLCDLW NSLDVYFSTA SILHLCCISV 120
121 DRYYAIVKPL KYPISMTKRV VGIMLLNTWI SPALLSFLPI FIGWYTTPQH QQFVIQNPTQ 180
181 CSFVVNKYYA VISSSISFWI PCTIMIFTYL AIFREANRQE KQLMMRHGNA MLMHRPSMQP 240
241 SGEALSGSGS SKTLTLHEVE QEHTPTKDKH LIKMKREHKA ARTLGIIMGT FILCWLPFFL 300
301 WYTLSMTCEE CQVPDIVVSI LFWIGYFNST LNPLIYAYFN RDFREAFRNT LLCLFCNWWK 360
361 DRHLPLDIDI RRSSLRYDQR AKSVYSESYL NSTTPSHRRQ SQMVDNL
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| Detection Method: | |
| Confidence: | 46.522879 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
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