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View Structure Prediction Details

Protein: NADD_CAMJR
Organism: Campylobacter jejuni RM1221
Length: 181 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NADD_CAMJR.

Description E-value Query
Range
Subject
Range
gi|58255112, gi|... - gi|58337795|ref|YP_194380.1| putative nicotinate-nucleotide adenyltransferase [Lactobacillus acidoph...
gi|227867820, gi... - gi|227904445|ref|ZP_04022250.1| nicotinate-nucleotide adenylyltransferase [Lactobacillus acidophilus...
165.0 [0..3] [178..30]
gi|48825491 - ref|ZP_00286739.1| COG1057: Nicotinic acid mononucleotide adenylyltransferase [Enterococcus faecium]
gi|69245738, gi|... - gi|69245738|ref|ZP_00603604.1| Cytidyltransferase-related:Probable nicotinate-nucleotide adenylyltra...
gi|293571010|ref... - nicotinate (nicotinamide) nucleotide adenylyltransferase [Enterococcus faecium E980]
165.0 [0..3] [177..29]
gi|21325123, gi|... - gi|62391195|ref|YP_226597.1| nicotinic acid mononucleotide adenylyltransferase [Corynebacterium glut...
165.0 [0..2] [179..18]
gi|28493436, gi|... - gi|28493436|ref|NP_787597.1| nicotinic acid mononucleotide adenylyltransferase [Tropheryma whipplei ...
165.0 [0..2] [178..12]
gi|54014851, gi|... - gi|54023343|ref|YP_117585.1| nicotinic acid mononucleotide adenylyltransferase [Nocardia farcinica I...
164.0 [0..2] [179..19]
gi|6714685, gi|2... - gi|6714685|emb|CAB66257.1| putative nicotinate-nucleotide adenylyltransferase [Streptomyces coelicol...
164.0 [0..2] [178..47]
NADD_THET8 - Probable nicotinate-nucleotide adenylyltransferase OS=Thermus thermophilus (strain HB8 / ATCC 27634 ...
164.0 [0..1] [178..1]
NADD_GEOKA - Probable nicotinate-nucleotide adenylyltransferase OS=Geobacillus kaustophilus GN=nadD PE=3 SV=1
NADD_GEOKA - Probable nicotinate-nucleotide adenylyltransferase OS=Geobacillus kaustophilus (strain HTA426) GN=na...
164.0 [0..2] [178..3]
gi|89084457, gi|... - gi|89100811|ref|ZP_01173663.1| nicotinic acid mononucleotide adenyltransferase [Bacillus sp. NRRL B-...
164.0 [0..2] [179..3]

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Predicted Domain #1
Region A:
Residues: [1-181]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIALFGGSF DPPHNGHNSV VLEALEKLDI DKLIIMPTYI NPFKQSFSAD EKQRFLWVKK  60
   61 LWGHLPKVEI CDFEIRQKRP VPSIESVKYL YKLYNPSKFY LLIGADHLEK LHLWHDFEKL 120
  121 NSLVEFVIAN RNDIGIPKNF KDLKTNKKIA SSFIRDTLNT NEVCEEIKDE VKKYYEKLQK 180
  181 N

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 39.0
Match: 1kamA
Description: Nicotinamide mononucleotide (NMN) adenylyltransferase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
nicotinate-nucleotide adenylyltransferase activity 2.83520682135534 bayes_pls_golite062009
nicotinamide-nucleotide adenylyltransferase activity 2.57110502211876 bayes_pls_golite062009
ligase activity, forming carbon-oxygen bonds 2.54008423253828 bayes_pls_golite062009
ligase activity, forming aminoacyl-tRNA and related compounds 2.54008423253828 bayes_pls_golite062009
aminoacyl-tRNA ligase activity 2.52910114154477 bayes_pls_golite062009
catalytic activity 2.37674226834122 bayes_pls_golite062009
ligase activity 1.92894388839884 bayes_pls_golite062009
adenylyltransferase activity 1.08055019963499 bayes_pls_golite062009
pantetheine-phosphate adenylyltransferase activity 0.454904507512502 bayes_pls_golite062009
pantoate-beta-alanine ligase activity 0.282286652169846 bayes_pls_golite062009
nucleotidyltransferase activity 0.2293846471193 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle