YRC Public Data Repository - Protein Structure Prediction

Protein:	FABZ_CAMJR
Organism:	Campylobacter jejuni RM1221
Length:	146 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FABZ_CAMJR.

Description	E-value	Query Range	Subject Range
FABZ_SHESA - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Shewanella sp. (strain ANA-3) GN=fabZ PE=3 ...	194.0	[0..2]	[145..8]
gi\|213969129, gi... - gi\|213969129\|ref\|ZP_03397268.1\| beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ [Pseudomona... FABZ_PSESM - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Pseudomonas syringae pv. tomato (strain DC3... FABZ_PSESM - (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Pseudomonas syringae pv. tomato GN=fabZ ...	194.0	[0..1]	[142..1]
FABZ_PSEU2 - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Pseudomonas syringae pv. syringae (strain B... FABZ_PSE14 - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Pseudomonas savastanoi pv. phaseolicola (st... tr\|F3G1L3\|F3G1L3... - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Pseudomonas syringae pv. pisi str. 1704B GN... gi\|237800154 - gi\|237800154\|ref\|ZP_04588615.1\| (3R)-hydroxymyristoyl-ACP dehydratase [Pseudomonas syringae pv. oryz...	194.0	[0..1]	[142..1]
SO1640 - (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase FABZ_SHEON - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Shewanella oneidensis (strain MR-1) GN=fabZ...	193.0	[0..2]	[145..8]
FABZ_SHESW - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Shewanella sp. (strain W3-18-1) GN=fabZ PE=... gi\|124509094, gi... - gi\|124547693\|ref\|ZP_01706549.1\| beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ [Shewanella... FABZ_SHEPC - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Shewanella putrefaciens (strain CN-32 / ATC...	193.0	[0..2]	[145..8]
FABZ_SHESR - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Shewanella sp. (strain MR-7) GN=fabZ PE=3 S... FABZ_SHESM - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Shewanella sp. (strain MR-4) GN=fabZ PE=3 S...	192.0	[0..2]	[145..8]
FABZ_PHOPR - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Photobacterium profundum GN=fabZ PE=3 SV=1 FABZ_PHOPR - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Photobacterium profundum (strain SS9) GN=fa...	191.0	[0..2]	[145..8]
gi\|90413540, gi\|... - gi\|90413540\|ref\|ZP_01221531.1\| (3R)-hydroxymyristoyl ACP dehydratase [Photobacterium profundum 3TCK]...	191.0	[0..2]	[145..8]
gi\|89095668, gi\|... - gi\|89095668\|ref\|ZP_01168562.1\| (3R)-hydroxymyristoyl ACP dehydratase [Bacillus sp. NRRL B-14911], gi...	191.0	[0..1]	[146..1]
FABZ_PSEE4 - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Pseudomonas entomophila (strain L48) GN=fab... gi\|95112171 - gi\|95112171\|emb\|CAK16898.1\| (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase [Pseudomonas en...	190.0	[0..1]	[142..1]

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Predicted Domain #1

Region A:
Residues: [1-146]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIDVMQIQEI LPHRYPFLLV DKITELKVKE VVLGYKNISI SDHVFMGHFP GHPIYPGVLI  60
   61 LEGMAQTGGV LAFESMEDKV DPKSKVVYFT GIDGAKFRNP VRPGDRLDYE MSVVKNRGNM 120
  121 WIFKGQAFVD GNLVAEAELK AMIVDK

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Detection Method:	PSI-BLAST
Confidence:	48.69897
Match:	1u1zA
Description:	The Structure of (3R)-hydroxyacyl-ACP dehydratase (FabZ)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
CoA hydrolase activity	1.75530090056705	bayes_pls_golite062009
catalytic activity	1.11649534052993	bayes_pls_golite062009
thiolester hydrolase activity	0.65794221902015	bayes_pls_golite062009
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity	0.57527342054578	bayes_pls_golite062009
3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity	0.57527342054578	bayes_pls_golite062009
acyl-CoA thioesterase activity	0.24094527143225	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: