YRC Public Data Repository - Protein Structure Prediction

Protein:	DAD2_KLULA
Organism:	Kluyveromyces lactis
Length:	132 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DAD2_KLULA.

Description	E-value	Query Range	Subject Range
gi\|151941622 - gi\|151941622\|gb\|EDN59985.1\| duo1 and dam1 interacting protein [Saccharomyces cerevisiae YJM789] DAD2_YEAST - DASH complex subunit DAD2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAD2 PE=1 SV=1 DAD2 - Essential subunit of the Dam1 complex (aka DASH complex), couples kinetochores to the force produced...	134.0	[0..2]	[131..3]
DAD2_CANGA - DASH complex subunit DAD2 OS=Candida glabrata GN=DAD2 PE=3 SV=1 DAD2_CANGA - DASH complex subunit DAD2 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / N...	131.0	[0..2]	[132..3]
DAD2_ASHGO - DASH complex subunit DAD2 OS=Ashbya gossypii GN=DAD2 PE=3 SV=1 DAD2_ASHGO - DASH complex subunit DAD2 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-10...	128.0	[0..1]	[132..1]
gi\|71004202, gi\|... - gi\|71004202\|ref\|XP_756767.1\| hypothetical protein UM00620.1 [Ustilago maydis 521], ref\|XP_398235.1\| ...	124.0	[0..4]	[128..39]
gi\|38108535, gi\|... - gi\|39968859\|ref\|XP_365820.1\| hypothetical protein MGG_02522 [Magnaporthe grisea 70-15], gb\|EAA54537....	121.0	[0..2]	[128..28]
gi\|90302101, gi\|... - gi\|90302101\|gb\|EAS31732.1\| hypothetical protein CIMG_07211 [Coccidioides immitis RS], gi\|119184935\|r...	120.0	[0..3]	[128..36]
gi\|114188929, gi... - gi\|115402013\|ref\|XP_001217083.1\| conserved hypothetical protein [Aspergillus terreus NIH2624], gi\|11...	112.0	[0..2]	[129..34]
DAD2_DEBHA - DASH complex subunit DAD2 - Debaryomyces hansenii (Yeast) (Torulaspora hansenii) gi\|49653621, gi\|... - gi\|50418869\|ref\|XP_457955.1\| hypothetical protein DEHA0C06897g [Debaryomyces hansenii CBS767], gi\|49...	112.0	[0..3]	[131..12]
gi\|85080891 - gi\|85080891\|ref\|XP_956625.1\| hypothetical protein NCU01841 [Neurospora crassa OR74A] gi\|28881231, gi\|... - gi\|32415603\|ref\|XP_328280.1\| predicted protein [Neurospora crassa], gi\|28917696\|gb\|EAA27389.1\| conse...	110.0	[0..2]	[128..22]
gi\|169604594, gi... - gi\|169604594\|ref\|XP_001795718.1\| hypothetical protein SNOG_05311 [Phaeosphaeria nodorum SN15], gi\|11...	110.0	[0..2]	[127..26]

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Predicted Domain #1

Region A:
Residues: [1-132]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFETEIETK RRELNYLKHV SALTQKLKAQ LDELSVQVAQ MNSNAVTVKD VMANWDSVLR  60
   61 SISQASISLL QYTENDYETG KWASKEEHRN QQGAEDESAA SESSEDNQQR QQDQLPPLPE 120
  121 TLVRVKVADD VE

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	71.638272
Match:	PF08654.1
Description:	No description for PF08654.1 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

		MCM Score	GO Score	GO Term	SCOP Match	SCOP Description
View	Download	0.862	N/A	N/A	f.34.1	Mechanosensitive channel protein MscS (YggB), transmembrane region

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits