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View Structure Prediction Details

Protein: CIPK1_ORYSA
Organism: Oryza sativa
Length: 449 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CIPK1_ORYSA.

Description E-value Query
Range
Subject
Range
gi|108707855 - gi|108707855|gb|ABF95650.1| CIPK-like protein 1, putative, expressed [Oryza sativa (japonica cultiva...
402.0 [0..1] [449..1]

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Predicted Domain #1
Region A:
Residues: [1-318]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYRAKRAALS PKVKRRVGKY ELGRTIGEGT FAKVRFAKNT ENDEPVAIKI LDKEKVQKHR  60
   61 LVEQIRREIC TMKLVKHPNV VRLFEVMGSK ARIFIVLEYV TGGELFEIIA TNGRLKEEEA 120
  121 RKYFQQLINA VDYCHSRGVY HRDLKLENLL LDASGNLKVS DFGLSALTEQ VKADGLLHTT 180
  181 CGTPNYVAPE VIEDRGYDGA AADIWSCGVI LYVLLAGFLP FEDDNIIALY KKISEAQFTC 240
  241 PSWFSTGAKK LITRILDPNP TTRITISQIL EDPWFKKGYK PPVFDEKYET SFDDVDAAFG 300
  301 DSEDRHVKEE TEDQPTSM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 75.522879
Match: 1zmuA
Description: Catalytic and ubiqutin-associated domains of MARK2/PAR-1: Wild type
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [319-449]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NAFELISLNQ ALNLDNLFEA KKEYKRETRF TSQCPPKEII TKIEEAAKPL GFDIQKKNYK  60
   61 MRMENLKAGR KGNLNVATEV FQVAPSLHVV ELKKAKGDTL EFQKFYRTLS TQLKDVVWKC 120
  121 DGEVEGNGAA A

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 18.69897
Match: 2ehbD
Description: No description for 2ehbD was found.

YRC Informatics Platform - Version 3.0
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