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View Structure Prediction Details

Protein: Phax-PA
Organism: Drosophila melanogaster
Length: 453 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Phax-PA.

Description E-value Query
Range
Subject
Range
gi|220958126, gi... - gi|220958126|gb|ACL91606.1| Phax-PA [synthetic construct], gi|220948712|gb|ACL86899.1| Phax-PA [synt...
gi|28573311, gi|... - ref|NP_610456.3| CG8069-PA [Drosophila melanogaster], gb|AAF58985.2| CG8069-PA, isoform A [Drosophil...
552.0 [0..1] [453..27]

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Predicted Domain #1
Region A:
Residues: [1-83]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMELHANDVD LEDGELSESD DDGVYTPLQR PDGAEKVASP LTTCHQIQTA LEDESQSNSD  60
   61 SSTAESSEDG CIKKLRTEST GPD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [84-453]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GHKKRKKRIR RTVMRRVPPT DAEMQPNRAR FKKYNVWASA LQEDALSENM RGCDVTRSGR  60
   61 DRNVENYDFS LRYRLNGENT LKRRLSNSSE DGGECSHPAH KRGRPSSRPI TGNQQRGLVK 120
  121 SRTGHRSRRG TSSASGSSDF CEPRHILDLN EVGERDPSDV ATEMASKLYE EKDELLVRVV 180
  181 EVLGIDVCLE LYKETQRIEA DGGMMIKNGI RRRTPGGVFL FLIKHHDNIT QEQQKRIFSE 240
  241 DRQSLSKSRK QIETLMRDRK VEELKKCLSK QVTELPTLNQ RKEYYMQGDE QSEDKQPGSL 300
  301 SNPPPSPVGA EQEHDSPEYR THEININLVD NAELPSTSKA AAAAQGAPLK DLISYDHDFL 360
  361 DVNCGDMDFF 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.15
Match: 1nwcA
Description: Crystal Structure of Aspartate-Semialdehyde Dehydrogenase from Haemophilus influenzae
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.670905439214691 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle