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View Structure Prediction Details

Protein: aak-1
Organism: Caenorhabditis elegans
Length: 418 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for aak-1.

Description E-value Query
Range
Subject
Range
aak-1 - Protein kinase status:Confirmed UniProt:P45894 protein_id:ABA54413.1
310.0 [0..1] [418..172]

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Predicted Domain #1
Region A:
Residues: [1-114]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDGDLLSTA CGSPNYAAPE LISNKLYVGP EVDLWSCGVI LYAMLCGTLP FDDQNVPTLF  60
   61 AKIKSGRYTV PYSMEKQAAD LISTMLQVDP VKRADVKRIV NHSWFRIDLP YYLF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 36.69897
Match: 2fh9A
Description: No description for 2fh9A was found.

Predicted Domain #2
Region A:
Residues: [115-188]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PECENESSIV DIDVVQSVAE KFDVKEEDVT GALLAEDHHH FLCIAYRLEV NHKRNADESS  60
   61 QKAMEDFWEI GKTM

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [189-418]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KMGSTSLPVG ATTKTNVGRK ILEGLKKEQK KLTWNLGIRA CLDPVETMKH VFLSLKSVDM  60
   61 EWKVLSMYHI IVRSKPTPIN PDPVKVSLQL FALDKKENNK GYLLDFKGLT EDEEAVPPSR 120
  121 CRSRAASVSV TLAKSKSDLN GNSSKVPMSP LSPMSPISPS VNIPKVRVDD ADASLKSSLN 180
  181 SSIYMADIEN SMESLDEVST QSSEPEAPIR SQTMEFFATC HIIMQALLAE 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 10.39794
Match: 2v8qA
Description: No description for 2v8qA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle