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View Structure Prediction Details

Protein: CE38853
Organism: Caenorhabditis elegans
Length: 188 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE38853.

Description E-value Query
Range
Subject
Range
gi|157762066 - gi|157762066|ref|XP_001673375.1| Hypothetical protein CBG08649 [Caenorhabditis briggsae AF16]
gi|39583960, gi|... - gi|39583960|emb|CAE64050.1| Hypothetical protein CBG08649 [Caenorhabditis briggsae], gi|187032473|em...
140.0 [0..1] [188..1]

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Predicted Domain #1
Region A:
Residues: [1-188]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKEIILIFY SFMVVFGHPP KCYLPQAKGT SSNCSYEASI RYHFDPKTNI CHAFKYEGCG  60
   61 GNVNNYETPG DCGQNCNVDE KTYIQCALGA PPIFDSRGNN NCPLTSEETG EGCESDEAVC 120
  121 KYFSTMALCC NKTVEVGLKE DQSTTCPSGK SRWQIGGITV LAKTCDDVIC PNGYTCQNGM 180
  181 FFSYCCEN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 15.221849
Match: 1bikA
Description: X-RAY STRUCTURE OF BIKUNIN FROM THE HUMAN INTER-ALPHA-INHIBITOR COMPLEX
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle