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View Structure Prediction Details

Protein: CE38396
Organism: Caenorhabditis elegans
Length: 705 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE38396.

Description E-value Query
Range
Subject
Range
gi|91087369 - gi|91087369|ref|XP_975635.1| PREDICTED: similar to translation elongation factor 2 [Tribolium castan...
511.0 [0..1] [700..1]

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Predicted Domain #1
Region A:
Residues: [1-705]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESLETALKQ AAATKPAEHI RNVCLVAHVD HGKTSFADSL VSANAVISSR MAGKLRYMDS  60
   61 REDEQTRGIT MKSSGISLLC EPLLINLIDS PGHVDFSGEV TSALILSDIA LLLIDVIEGI 120
  121 CSQTEALIRQ VIRNGQAMIL VINKIDRLRV ELKMSSSEAY QHMSRLIEGV NSCISQVLGG 180
  181 IVLEDDTWGN IEESEAKLHF DPAKGNVIFS SALHSYAFGC EDFAQIAAEK MKVEKSALLP 240
  241 AMFGDFWIDS TGSIRDGAAV KNKATLFERI VLEPLWRIHD LGLVENDATK LAEAAKKLGI 300
  301 NLKSRRANEA FDELMRTWLP LPKASFRAVA RAPNVRSTFD TQHRLDHLTG HRLDHPLRKF 360
  361 VLECNPEAMT LVFVVKLLQT EDKNLTSRRA ICRVLSGTLR KGDTLYVLQQ QNNSSEVTST 420
  421 KIDRISILRG RDSIPTDTVT SGMICTIDAE ILLQNTTLCE KPDFPCLKIG SQTGEALVRV 480
  481 SISTQQLDDM DDLREKLKLL ALLDTSLKVM ELENGELAMV TAGEVHLQKC IKDLNDLGLV 540
  541 DLDVSEPIVP FMETVIEDSV LSAPQIIEQE TECRIREALY IKLRVVPLGD AVVEVLSEDI 600
  601 NEATNLFEVV SLMPVVESFS FCDQLRKFTS GMASAQLQFS HWQVIDEDPY WTPSTLEEIE 660
  661 EFGLKGDSPN HARGYMDAVR RRKGLPTEDL IVESAEKQRN LKKNK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 130.0
Match: 1n0uA
Description: Elongation factor 2 (eEF-2), domain II; Elongation factor 2 (eEF-2), N-terminal (G) domain; Elongation factor 2 (eEF-2), domain IV; Elongation factor 2 (eEF-2)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle