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View Structure Prediction Details

Protein: CE37971
Organism: Caenorhabditis elegans
Length: 390 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE37971.

Description E-value Query
Range
Subject
Range
gi|68388302 - gi|68388302|ref|XP_696268.1| PREDICTED: similar to slow myosin heavy chain 1 [Danio rerio]
254.0 [0..1] [388..1861]

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Predicted Domain #1
Region A:
Residues: [1-296]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSNAEIEAL EKKCKELEEN HKREEEARKK YADELRAKID QYEETKAAHE RDRMLLDKRN  60
   61 KEIEELNRNL KAESESNYEN AKKASELERL REKEKKEWDE KERRMQMEAE NEANQHKTQT 120
  121 EKLKDQISTL QTDFEKVSAQ RKAQEQMNAE LVDEVASFKQ KAERAEEQKK KLVEDLDSLD 180
  181 DKLAAEKRAN NEHVKHNKKL EGQLKATQTQ LTLALKEKHE FDVDCKRRES EIGELKLKAQ 240
  241 GDANLISKLQ AMLRKCISRI EELEEDLLEE RKLRMKAERQ FNELRSEYEV LQEQMA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 34.221849
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [297-390]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EASGQLTAEA HINKVRAEEV SNLRRDLQKR NLNHEAYISD LCNMQYATVN NLRNLSQQSA  60
   61 TLESEALRIL DHRRALSKQP LPRVYVEDPD SDSD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.154902
Match: 2dfsA
Description: No description for 2dfsA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle