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View Structure Prediction Details

Protein: kin-2
Organism: Caenorhabditis elegans
Length: 366 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for kin-2.

Description E-value Query
Range
Subject
Range
gi|74177287 - gi|74177287|dbj|BAE34559.1| unnamed protein product [Mus musculus]
280.0 [0..1] [364..135]

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Predicted Domain #1
Region A:
Residues: [1-62]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGGNEEDQL AQCQAYVQRH NIQQLVKEAI VVLCIHKPDN PVLFLKDHFE KLNEQRAQEG  60
   61 GN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [63-366]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PDAADDDDII VEPPKRSGGR RTGISAEPIK EDDTEYKKVV IPKDDATRRS LESAMRKNLL  60
   61 FAHLEEDEQK TMYDAMFPVE KSAGETIIEQ GEEGDNFYVI DKGTVDVYVN HEYVLTINEG 120
  121 GSFGELALIY GTPRAATVIA KTDVKLWAID RLTYRRILMG SVTKKRKMYD EFLSKVQILA 180
  181 DLDQWERANV ADALERCDFE PGTHVVEQGQ PGDEFFIILE GEANVLQKRS DDAPFDVVGH 240
  241 LGMSDYFGEI ALLLDRPRAA TVVAKTHLKC IKLDRNRFER VMGPVREILK RDVSNYNSYV 300
  301 KLMT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 58.522879
Match: 1rgsA
Description: REGULATORY SUBUNIT OF CAMP DEPENDENT PROTEIN KINASE
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle