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View Structure Prediction Details

Protein: CE41326
Organism: Caenorhabditis elegans
Length: 450 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE41326.

Description E-value Query
Range
Subject
Range
gi|78495751, gi|... - gi|78495751|ref|ZP_00847969.1| Major facilitator superfamily MFS_1 [Rhodopseudomonas palustris BisB1...
181.0 [0..10] [434..423]

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Predicted Domain #1
Region A:
Residues: [1-450]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTIERATRQN VRRGRPPGTR RAVVFDDTPQ PSEWRNIWVA ICGFYILFAE TGVRQVMNGF  60
   61 VEPVIKTYNC TKDQADTAVL VVPMASSLIL GPFCSIFYQR SGARISIIAG SFLTGGSFVV 120
  121 GPFCKNIYLL MLATFGMGIG CGLMRNSIIS IQCEYFKKKR NTVMAAISIG PGLGIFILPR 180
  181 TLKFIMVKYN SWGPAWWFLS LFYIVSAIMG LFITKPPSEQ TSTFSFGSAF KVCKKLEFDL 240
  241 HLIACFFASS VMFIYIANIL ILMESENIED KEILYGYQGL TSIAGKFVLT FVMSLNKVHN 300
  301 GIIMILSYVI AQLSLSAAAF CYKFWQFRLQ NAFAGIGIGL YQACLAPFLV ALVGPSQLAY 360
  361 ALGFTNLING VSIISGVWIS GFASKGTTGD HARSAFFVSI WLGLAAIVMS IATSSVLMAR 420
  421 EKHKRKPSMK QMKHSSELNA LTNITSVENS 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 31.154902
Match: 1pw4A
Description: Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
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