| Protein: | twk-32 |
| Organism: | Caenorhabditis elegans |
| Length: | 614 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for twk-32.
| Description | E-value | Query Range |
Subject Range |
|
|
276.0 | [0..28] | [556..2] |
|
Region A: Residues: [1-242] |
1 11 21 31 41 51
| | | | | |
1 MCGGALLSSG LCRFSELTPG QFGLTKQLVF RLALPHITLL VVSILYAVFG GWMLTLIKYS 60
61 QQTTHQAIMF DQTRQNFAKR LALIGNKEEF ESIVDELVEK TYDFYTMEDG HRWQEAAFNA 120
121 NPLTNFTSNL FFAATTLTSI GYGIDAPESL IGRVFCLVYL FFGIPLYLIT IADMAKFCTE 180
181 LMNRTYTEII KYKYRVKRRY KRWKSGRIRR ESMKVGQVII AGGEDEVAEF LWTHLEHAQF 240
241 VE
|
| Detection Method: |  |
| Confidence: | 23.522879 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [243-614] |
1 11 21 31 41 51
| | | | | |
1 VPFLLVIGIL LLYIGLSSWI ISWVENWNMM DGFYFVMMSV LTIGFGDLVP RNEIFAVPIL 60
61 FIILAGLVLT TTCIDVVGAY YIDRLHFFGR RLDDDPLSWL KEVQQRRIEA MKKEAMRKLF 120
121 ETVTALHHIR LTAFKQLTQN YDEHLRGKAP DPPRHLIASH ATADSVMLRW SAPIYVDEGK 180
181 RYWYTITYKP RTPQRRNNVV AVDFINKDRY LVTGLKSFTL YEFSVYVTTR YGQSVPIKVQ 240
241 EYTEPCTVPQ SVRIDAISDE TATISWRAPK MNNGPESYVI QFVQEPAPQF VYWCKYKVGS 300
301 STRFTLTDLH ADTRYIICVT AEHNHGLAAM SKSMRFRTKK WWGDEDSTCL RIPGTSHRLS 360
361 IASAISTLTA LR
|
| Detection Method: | |
| Confidence: | 26.30103 |
| Match: | 1fnfA |
| Description: | FRAGMENT OF HUMAN FIBRONECTIN ENCOMPASSING TYPE-III REPEATS 7 THROUGH 10 |
Matching Structure (courtesy of the PDB): |
|
