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View Structure Prediction Details

Protein: CE40525
Organism: Caenorhabditis elegans
Length: 301 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE40525.

Description E-value Query
Range
Subject
Range
gi|57091503 - gi|57091503|ref|XP_548097.1| PREDICTED: similar to 5-nucleotidase, cytosolic III isoform 1 [Canis fa...
337.0 [0..11] [301..8]

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Predicted Domain #1
Region A:
Residues: [1-301]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGSLKLDEL LSLPQVHVKD IKSLTDKLQN IVSGGADQLM VISDFDFTLS RFADKSGNRC  60
   61 SSCYCVFDSA VGTNNPEWCR KFVGLYHKYG PIEHDHSLSI EEKVPFMEAW WQQSHGLIIQ 120
  121 GGFKKQAIDD YVAHCNIQLR DNADIMMKKM TNHAVPFIIF SAGIGTIIEM YLRHKFGRVE 180
  181 SNTHVVSNMM GFDDDGYVNS FSDPLIHVFC KNSSVMPADR TFSEQIEGRK NVILLGDSVG 240
  241 DAFMDVGVEE EQVSLKIGFV NHDADKLVDK YLNYFDIVLV DDQSMDIPNQ ILEAIYNNKN 300
  301 Y

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 87.045757
Match: 2bduA
Description: X-Ray Structure of a Cytosolic 5'-Nucleotidase III from Mus Musculus MM.158936
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle