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View Structure Prediction Details

Protein: CE40408
Organism: Caenorhabditis elegans
Length: 396 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE40408.

Description E-value Query
Range
Subject
Range
gi|76633284 - gi|76633284|ref|XP_872829.1| PREDICTED: similar to erythrocyte protein band 4.1-like 1 isoform L iso...
292.0 [0..2] [395..85]

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Predicted Domain #1
Region A:
Residues: [1-396]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDPNRIVSA SRRPKALIRL LDSQQIEVVL HSRLSVEDVL RLVAEKVDLS FPDSQYFCLG  60
   61 FSDNLNNFHW LDGSVILYDL VASTSNPKGT LTLSHHVRFF VDTIYEVQCA STAKLFFFDI 120
  121 HNQLARHELL VTSEDYFELV AILVSVFVPD CQEHTTAEAI SRIMPMSHPP YILLKTDQSE 180
  181 VERRVFEKFR YYRRLPVGTG MISFIKLAEK SESYGYRMYE ALNENNDKCI LSIGYKGIYI 240
  241 YRRSRHQNLI TPYLAYPWRV IDNLYYRDKK FSIEIREPKK NESSENVSDD VILINDRQLS 300
  301 EAFSHPTTQV SCGRRRSNNQ QPRVLLFPFT CQTPLVCRTV WMSAIAQHRF FLERKELKKV 360
  361 SGDLLFFLPF LFRQSVLLLV FQSPFRPGGA HFAQKA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 65.154902
Match: 2i1jA
Description: No description for 2i1jA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle