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View Structure Prediction Details

Protein: CE41164
Organism: Caenorhabditis elegans
Length: 243 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE41164.

Description E-value Query
Range
Subject
Range
CE20126 - WBGene00012180 status:Predicted TR:Q9XU65 protein_id:CAB05634.1
229.0 [0..1] [210..1]

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Predicted Domain #1
Region A:
Residues: [1-96]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQAEVINQE RSFYLENNTA PISLASDVKK SGFLSTLASY LTSNAKSDPK PVIQQKKLMN  60
   61 SWDDVDLVKL NILVCNVLYE PHSYELLFRE IERVFG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.806 N/A N/A a.24.7 FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)
View Download 0.569 N/A N/A a.118.8 TPR-like
View Download 0.508 N/A N/A a.24.7 FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)
View Download 0.496 N/A N/A a.142.1 PTS-regulatory domain, PRD
View Download 0.460 N/A N/A a.24.7 FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)

Predicted Domain #2
Region A:
Residues: [97-243]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RRREHCFYGA LGVLLTLVLL NDAVGAITAF MTLIIPTFMT VTAISSTSSY ENPSFLKNHQ  60
   61 DFFVRYWTVY AVFVTGESFL SSLIHWDLRL FRLIFMSMCL STRIPVLAAT YAKILGIVST 120
  121 IREVIESRNF EPSPVVMVSA SKKTKTG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle