YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: ssup-72
Organism: Caenorhabditis elegans
Length: 197 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ssup-72.

Description E-value Query
Range
Subject
Range
SSU72_CHICK - RNA polymerase II subunit A C-terminal domain phosphatase SSU72 OS=Gallus gallus GN=SSU72 PE=2 SV=1
382.0 [0..3] [197..2]

Back

Predicted Domain #1
Region A:
Residues: [1-197]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEYSSKLRFA VSCSSNMNRS MEAHGILKKR GFNIESYGSG NQVKMPGPTV DKPNCYEFGP  60
   61 TTYEDIYADL TNKDLHLYTQ NGLLHMVDRN RRIKSRPQRF QAETREFDIV LCLEERVFDQ 120
  121 VVDFLNRSVG KSGNPVHVIN IDIEDNAEEA TFGAFFVADL CEKLERSEDF EEDIDQIITD 180
  181 LEENNPKRNL LHTICFY

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.3
Match: 2fekA
Description: No description for 2fekA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle