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View Structure Prediction Details

Protein: CE38582
Organism: Caenorhabditis elegans
Length: 366 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE38582.

Description E-value Query
Range
Subject
Range
gi|91798521, gi|... - gi|92115431|ref|YP_575359.1| putative inner membrane protein translocase component YidC [Chromohalob...
308.0 [0..8] [306..287]

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Predicted Domain #1
Region A:
Residues: [1-80]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSVSIRTAA ASFRLAPTRL RLIRPVIATC QTRNISSNDV FKITESASIP DLPPLPTPPI  60
   61 PGMSVDELIA SGASVLEELG 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [81-366]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LWTWWKPSSY FRWALESIHV HLDIPWWVTI VAATVTLRAL LIGVPVMSQK LVAKQSMYRK  60
   61 EMNEFRDRID EARKENNQLL QQQILLEQRD FLRSKDIRLG RQFMVMAANG AVFATQFFAI 120
  121 KKMVVVNYPG LSTGGTLWFT DLTATDPYYA LPFISAATMA LVTKVGIEMG TSADQMPPIM 180
  181 RAFMTYGLPV VIFGVSSQFA TGLCVYWTAS NAVSLIYAAA FKVDAIRKIF GIPPVVPLPP 240
  241 SAVQKNAISQ VLKSYKDNKA IPPSMADLRQ RDASSFKKAG RGKPIT

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 5.721246
Match: PF02096.11
Description: No description for PF02096.11 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle