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View Structure Prediction Details

Protein: CE39090
Organism: Caenorhabditis elegans
Length: 99 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE39090.

Description E-value Query
Range
Subject
Range
gi|157746529 - gi|157746529|ref|XP_001668360.1| Hypothetical protein CBG12350 [Caenorhabditis briggsae AF16]
gi|39589723 - gi|39589723|emb|CAE66958.1| Hypothetical protein CBG12350 [Caenorhabditis briggsae]
166.0 [0..1] [99..301]

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Predicted Domain #1
Region A:
Residues: [1-99]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVCGDCEKKL TKIVGVDPYR NKKVNRNADG SGPKTVTTKN RLIGVQKKAT IVGAKCKLCK  60
   61 MLIHQPGSHY CSTCAYQKGI CAMCGKKIQN TKGLRQSTT

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.0
Match: 2dfyX
Description: No description for 2dfyX was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle