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View Structure Prediction Details

Protein: TolQ
Organism: Rhodopseudomonas palustris CGA009
Length: 236 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TolQ.

Description E-value Query
Range
Subject
Range
gi|86571960, gi|... - gi|86748932|ref|YP_485428.1| MotA/TolQ/ExbB proton channel [Rhodopseudomonas palustris HaA2], gi|865...
210.0 [0..1] [235..1]

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Predicted Domain #1
Region A:
Residues: [1-86]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNPADVTQLA PAVSTDVSLL SLFWHAHWVV KSIMLGLLGC SVWVWAIAID KLLLFSRTKR  60
   61 AMDRFEQAFW SGESIDELYR ALSAKP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [87-236]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 THSMAACFVA AMREWKRSFE SHSRSFAGLQ MRIEKVMNVS IAREVERLER RLLVLATVGS  60
   61 AGPFVGLFGT VWGIMSSFQS IAASKNTSLA VVAPGIAEAL FATAIGLIAA IPATIFYNKF 120
  121 TSEVNRQTQR LEGFADEFSA ILSRQIDERT 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 41.221849
Match: PF01618.7
Description: No description for PF01618.7 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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