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View Structure Prediction Details

Protein: gi|30138255, gi|...
Organism: Nitrosomonas europaea ATCC 19718
Length: 142 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30138255, gi|....

Description E-value Query
Range
Subject
Range
gi|71549805, gi|... - gi|71549805|ref|ZP_00669987.1| Biopolymer transport protein ExbD/TolR [Nitrosomonas eutropha C71], g...
159.0 [0..1] [141..1]

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Predicted Domain #1
Region A:
Residues: [1-142]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFGDSSRYQ SKTAMSEINV VPLVDVMLVL LIIFMITAPL LTHSVKVDLP KASSSPNLTQ  60
   61 PEHIEFAIRA DGSFYWGGEP VTLDQLPSRF AAAVEQSQQT ELHIRADRDT HYELVAKVMS 120
  121 IAASAGLARI GFVTDPTGEQ QP

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 19.522879
Match: PF02472.7
Description: No description for PF02472.7 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.908 N/A N/A c.46.1 Rhodanese/Cell cycle control phosphatase


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle