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View Structure Prediction Details

Protein: gi|125569591, gi...
Organism: Oryza sativa Japonica Group
Length: 279 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|125569591, gi....

Description E-value Query
Range
Subject
Range
gi|222632297, gi... - gi|52353496|gb|AAU44062.1| unknown protein [Oryza sativa Japonica Group], gi|222632297|gb|EEE64429.1...
237.0 [0..1] [279..1]

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Predicted Domain #1
Region A:
Residues: [1-83]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEEQPRAAA EGGGETLMEK IADKLHIGGD GSSSDSDADE RKQPKPSAPP APAEVATESF  60
   61 VDSAAAAAAE AKAKVFRLFG REE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [84-149]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PIHKVLGGGK PADVFLWRNR NISAGVLGGA TAIWILFELL GYHLLTFVCH GLIFSLGLLF  60
   61 LWSNAS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [150-202]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SFINKSPPRI PEVIIPEDLV VNIALSTRYE INRAFANLRQ IALGRDIKKF LIV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 9.0
Match: 2g31A
Description: No description for 2g31A was found.

Predicted Domain #4
Region A:
Residues: [203-279]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IAGLWLLSVL GSCCNFLTLV YIVFVVLHTV PILYEKYEDQ IDSYGEKGWV EIKKQYAVLD  60
   61 AKVLSKVPRG PLKDKKH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle