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View Structure Prediction Details

Protein: CG11779-PC
Organism: Drosophila melanogaster
Length: 430 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG11779-PC.

Description E-value Query
Range
Subject
Range
gi|63093891 - gi|63093891|dbj|BAD98172.1| hypothetical protein [Drosophila parabipectinata]
307.0 [0..1] [423..1]

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Predicted Domain #1
Region A:
Residues: [1-350]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKATSCRPIP FINFRIVRYF YRPRRLNKYY DIYRIAALVR DRACLFTCQQ ASQNLQQQQP  60
   61 RFYSAPGRRA GFFSQFFDNM KAEMDKNKEI KDNIRKFREE AQKLEESDAL KSARQKFNIV 120
  121 ESEAQKSSSM LKEQLGAIKE RVGDVLEDAS KSHLAKKVTE ELSKKARGVS DTISDTSGKL 180
  181 GQTSAFQAIS NTTTTIKKEM DSASIENRVY RAPAKLRKRV QLVMSDSDRV VEPNTEATGM 240
  241 ELHKDSKFYE SWENFKNNNT YVNKVLDWKV KYDESENPVI RASRLLTDKV SDVMGGLFSK 300
  301 TELSETMTEL VKIDPSFDQK DFLRDCETDI IPNILESIVR GDLEILKDWC 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.69897
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [351-430]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FESTFNIIAN PIKEAKKAGV YLDSKILDIE NIELAMGKVM EQGPVLIITF QAQQIMCVRD  60
   61 QKSQVVEGDP EKPKPSPRRI 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 35.0
Match: 2cw9A
Description: Crystal structure of human Tim44 C-terminal domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle