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View Structure Prediction Details

Protein: Mgat2-PA
Organism: Drosophila melanogaster
Length: 608 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Mgat2-PA.

Description E-value Query
Range
Subject
Range
gi|38677997 - gi|38677997|emb|CAC83074.1| alpha-1,6-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase...
943.0 [0..18] [608..1]

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Predicted Domain #1
Region A:
Residues: [1-107]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKMRGRILI PLPNTGAMGR KRNNFYMRSL FLLALGIFGL LQYNNFNYLD SRDNVLGDAV  60
   61 TNDSDDAILA MVPATLHKYL TPHSRNHSAS GAGALNGAAL LLNASSP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [108-285]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GAATASTISF DVYHPPNITE IKRQIVRYND MQMVLNEDVF GPLQNDSVII VVQVHTRITY  60
   61 LRHLIVSLAQ ARDISKVLLV FSHDYYDDDI NDLVQQIDFC KVMQIFYPYS IQTHPNEYPG 120
  121 VDPNDCPRNI KKEQALITNC NNAMYPDLYG HYREAKFTQT KHHWIWKANR VFNELEVT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [286-432]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RYHTGLVLFL EEDHYVAEDF LYLLAMMQQR TKDLCPQCNV LSLGTYLKTF NYYTYHSKTN  60
   61 KKSYASSLIS TNSLLGYNRN NNRNSVQLAV SSSYSSSSSA QSPPPSKVYV GDTSDNQRAS 120
  121 DSSSRRGNLI NTVTDTATAT AATSDTS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [433-608]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NNEQSSHSSS KNGAQTWNYH VLPSLYSVYQ KVEVMPWVSS KHNMGFAFNR TTWSNIRKCA  60
   61 RHFCTYDDYN WDWSLQHVSQ QCLRRKLHAM IVKGPRVFHI GECGVHHKNK NCESNQVISK 120
  121 VQHVLRIARN SHQLFPRSLT LTVPSLMKKS KLRKGNGGWG DMRDHELCLN MTLATR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle