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View Structure Prediction Details

Protein: gi|42561854, gi|...
Organism: Arabidopsis thaliana
Length: 348 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42561854, gi|....

Description E-value Query
Range
Subject
Range
gi|24030215 - gi|24030215|gb|AAN41286.1| unknown protein [Arabidopsis thaliana]
684.0 [0..1] [348..26]

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Predicted Domain #1
Region A:
Residues: [1-189]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAVEEVDDV GRTIEEETVC EKRERGEEAE TLTPWEQHSS IISIPRFDYK APSSLLHHSH  60
   61 SGFLVTCNIK REKSATKEVM SILGKYIGSM HEEKPEVLNS TASKKQKVCA QETEEGGEKT 120
  121 VPLENDALQE TGENPNVEDL KLANEEHNSL MSLVKLTKSG LLLFTFPVEN SPNTTNIVSR 180
  181 VFQSMESGA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [190-348]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LKAPIWCHRI FPVQATCGLT EKELRETVSK LVQRFVNDKD NTLSKPVKFA AGYQRRGAEE  60
   61 TKGKIRKDAS DVLVQCPLLD RIKCFETVAA GVKDIVPDSV VDLKSPELCV LVELLPLSRI 120
  121 SSGSFVAAVS VLPHRLVSTK PKLCIKPLVP ESKHKKGPN

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.38
Match: 2dirA
Description: No description for 2dirA was found.

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