| Protein: | LFY_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 420 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LFY_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
666.0 | [0..1] | [420..1] |
|
|
664.0 | [0..1] | [420..1] |
|
|
655.0 | [0..1] | [420..1] |
|
|
653.0 | [0..1] | [416..1] |
|
|
633.0 | [0..1] | [400..1] |
|
|
627.0 | [0..1] | [398..1] |
|
|
627.0 | [0..1] | [387..1] |
|
Region A: Residues: [1-154] |
1 11 21 31 41 51
| | | | | |
1 MDPEGFTSGL FRWNPTRALV QAPPPVPPPL QQQPVTPQTA AFGMRLGGLE GLFGPYGIRF 60
61 YTAAKIAELG FTASTLVGMK DEELEEMMNS LSHIFRWELL VGERYGIKAA VRAERRRLQE 120
121 EEEEESSRRR HLLLSAAGDS GTHHALDALS QEGL
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [155-251] |
1 11 21 31 41 51
| | | | | |
1 SEEPVQQQDQ TDAAGNNGGG GSGYWDAGQG KMKKQQQQRR RKKPMLTSVE TDEDVNEGED 60
61 DDGMDNGNGG SGLGTERQRE HPFIVTEPGE VARGKKN
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [252-302] |
1 11 21 31 41 51
| | | | | |
1 GLDYLFHLYE QCREFLLQVQ TIAKDRGEKC PTKVTNQVFR YAKKSGASYI N
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.724 | N/A | N/A | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.666 | N/A | N/A | a.7.17 | Description not found. |
| View | Download | 0.636 | N/A | N/A | a.5.7 | 4-hydroxy-2-oxovalerate aldolase DmpG, communication domain |
| View | Download | 0.636 | N/A | N/A | a.5.7 | 4-hydroxy-2-oxovalerate aldolase DmpG, communication domain |
| View | Download | 0.599 | N/A | N/A | a.108.1 | Ribosomal protein L7/12, oligomerisation (N-terminal) domain |
| View | Download | 0.568 | N/A | N/A | a.251.1 | Description not found. |
| View | Download | 0.561 | N/A | N/A | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.509 | N/A | N/A | a.5.7 | 4-hydroxy-2-oxovalerate aldolase DmpG, communication domain |
| View | Download | 0.509 | N/A | N/A | a.5.7 | 4-hydroxy-2-oxovalerate aldolase DmpG, communication domain |
| View | Download | 0.504 | N/A | N/A | a.5.2 | UBA-like |
| View | Download | 0.265 | N/A | N/A | a.8.5 | Description not found. |
| View | Download | 0.250 | N/A | N/A | a.8.5 | Description not found. |
| View | Download | 0.227 | N/A | N/A | a.37.1 | A DNA-binding domain in eukaryotic transcription factors |
| View | Download | 0.225 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.220 | N/A | N/A | a.108.1 | Ribosomal protein L7/12, oligomerisation (N-terminal) domain |
|
Region A: Residues: [303-420] |
1 11 21 31 41 51
| | | | | |
1 KPKMRHYVHC YALHCLDEEA SNALRRAFKE RGENVGSWRQ ACYKPLVNIA CRHGWDIDAV 60
61 FNAHPRLSIW YVPTKLRQLC HLERNNAVAA AAALVGGISC TGSSTSGRGG CGGDDLRF
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.826 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.826 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.722 | c.53.1 | Resolvase-like |
| View | Download | 0.722 | c.53.1 | Resolvase-like |
| View | Download | 0.617 | c.15.1 | BRCT domain |
| View | Download | 0.587 | c.47.1 | Thioredoxin-like |
| View | Download | 0.578 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.578 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.557 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.557 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.408 | c.47.1 | Thioredoxin-like |
| View | Download | 0.298 | d.108.1 | Acyl-CoA N-acyltransferases (Nat) |
| View | Download | 0.259 | c.8.1 | Phosphohistidine domain |
| View | Download | 0.256 | c.23.1 | CheY-like |
| View | Download | 0.228 | c.23.1 | CheY-like |
