| Protein: | RPS1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 416 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RPS1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
304.0 | [0..82] | [415..77] |
|
Region A: Residues: [1-335] |
1 11 21 31 41 51
| | | | | |
1 MASLAQQFSG LRCSPLSSSS RLSRRASKNF PQNKSASVSP TIVAAVAMSS GQTKERLELK 60
61 KMFEDAYERC RTSPMEGVAF TVDDFAAAIE QYDFNSEIGT RVKGTVFKTD ANGALVDISA 120
121 KSSAYLSVEQ ACIHRIKHVE EAGIVPGMVE EFVIIGENES DDSLLLSLRN IQYELAWERC 180
181 RQLQAEDVIV KAKVIGANKG GLVALVEGLR GFVPFSQISS KAAAEELLEK EIPLKFVEVD 240
241 EEQTKLVLSN RKAVADSQAQ LGIGSVVLGV VQSLKPYGAF IDIGGINGLL HVSQISHDRV 300
301 SDIATVLQPG DTLKVMILSH DRDRGRVSLS TKKLE
|
| Detection Method: |  |
| Confidence: | 50.39794 |
| Match: | 1e3hA |
| Description: | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3; Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domains 1 and 4; Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 6; Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domains 2 and 5 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [336-416] |
1 11 21 31 41 51
| | | | | |
1 PTPGDMIRNP KLVFEKAEEM AQTFRQRIAQ AEAMARADML RFQPESGLTL SSDGILGPLG 60
61 SELPDDGVDL TVDDIPSAVD I
|
| Detection Method: | |
| Confidence: | 18.522879 |
| Match: | 1yz6A |
| Description: | Crystal structure of intact alpha subunit of aIF2 from Pyrococcus abyssi |
Matching Structure (courtesy of the PDB): |
|
