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View Structure Prediction Details

Protein: GOLSA_ARATH
Organism: Arabidopsis thaliana
Length: 328 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GOLSA_ARATH.

Description E-value Query
Range
Subject
Range
GOLS6_ARATH - Galactinol synthase 6 OS=Arabidopsis thaliana GN=GOLS6 PE=2 SV=1
266.0 [0..1] [324..1]

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Predicted Domain #1
Region A:
Residues: [1-328]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPTEMNIER KVEADVAVIP NDGKRAYVTF LAGNQDYWMG VVGLAKGLRK VKAAYPLVVA  60
   61 MLPDVPKEHR QILVAQGCII REIEPVYPPE NQAGYAMAYY VINYSKLRIW EFVEYEKMIY 120
  121 LDGDIQVFSN IDHLFDTPSG YLYAVKDCFC EGSWSKTPQY KIGYCQQSPE KVRWPMNSLG 180
  181 HVPPLYFNAG MLVFEPNLLT YEDLLQTVQV TTPTSFAEQP IPSTYNLVLA MLWRHPECID 240
  241 LDQINVVHYC AKGSKPWRFT GEEEHMDRED IKMLVKKWWD IYEDTSLDYK TFVENESKLN 300
  301 PIVAALASKE SGCDGLTSLA PSAAKSNP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 45.30103
Match: 1zcvA
Description: apo form of a mutant of glycogenin in which Asp159 is replaced by Asn
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.3567084433464 bayes_pls_golite062009
transferase activity 1.04375515050786 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle