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View Structure Prediction Details

Protein: CNIF3_ARATH
Organism: Arabidopsis thaliana
Length: 475 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CNIF3_ARATH.

Description E-value Query
Range
Subject
Range
gi|89200187, gi|... - gi|89200187|ref|ZP_01178942.1| Cysteine desulphurases, SufS [Bacillus cereus subsp. cytotoxis NVH 39...
298.0 [0..55] [469..1]

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Predicted Domain #1
Region A:
Residues: [1-475]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSLSPPEE ASYHHRHTKR YTSSASSASS TTNGTVESSV SDFVKRPKIS HPNYISSSEI  60
   61 ESEFSHHDPD FARINNGSFG CCPSSILALQ RDWQLRFLRQ PDRFYFDELK PKISDSRSVI 120
  121 KRLINAEHDD EVSIVDNATT AAAIVLQQTA WAFREGRFDK GDAVVMLHYA YGSVKKSVEA 180
  181 YVTRSGGHVT EVQLPFPVIS ADEIIDRFRI GLESGKANGR RVRLALIDHV TSMPSVVIPI 240
  241 KELVKICRRE GVDQVFVDAA HGIGCVDVDM KEIGADFYTS NLHKWFFAPP SVAFLYCRKS 300
  301 SNGGVADLHH PVVSNEYGNG LAVESSWVGT RDYSAQLVVP SILEFVNRFE GGIDGIKKRN 360
  361 HESVVEMGQM LVKSWGTQLG CPPEMCASMI MVGLPVCLGV SSESDVLKLR TFLREKFRIE 420
  421 IPIYFRPPGD GEIDPITGYV RISFQVYNKP EDYHRLRDAI NGLVRDGFKC TSLSC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 71.30103
Match: 1p3wB
Description: Cysteine desulfurase IscS
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.53236054463719 bayes_pls_golite062009
transferase activity 0.936789182452995 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle