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View Structure Prediction Details

Protein: CALS5_ARATH
Organism: Arabidopsis thaliana
Length: 1923 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CALS5_ARATH.

Description E-value Query
Range
Subject
Range
gi|13649388 - gi|13649388|gb|AAK37413.1|AF237733_1 callose synthase 1 catalytic subunit [Arabidopsis thaliana]
2837.0 [0..1] [1923..1]
gi|23503034 - gi|23503034|gb|AAK49452.2|AF304372_1 putative beta-1,3-glucan synthase [Nicotiana alata]
2799.0 [0..3] [1923..14]
gi|48716406, gi|... - gi|50916185|ref|XP_468556.1| putative callose synthase 1 catalytic subunit [Oryza sativa (japonica c...
2659.0 [0..17] [1923..35]
gi|92896783 - gi|92896783|gb|ABE93351.1| IMP dehydrogenase/GMP reductase [Medicago truncatula]
2607.0 [0..1] [1923..1]

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Predicted Domain #1
Region A:
Residues: [1-197]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQSSTSHDS GPQGLMRRPS RSAATTVSIE VFDHEVVPAS LGTIAPILRV AAEIEHERPR  60
   61 VAYLCRFYAF EKAHRLDPSS GGRGVRQFKT LLFQRLERDN ASSLASRVKK TDGREVESFY 120
  121 QQYYEHYVRA LDQGDQADRA QLGKAYQTAG VLFEVLMAVN KSEKVEAVAP EIIAAARDVQ 180
  181 EKNEIYAPYN ILPLDSA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [198-411]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GASQSVMQLE EVKAAVAALG NTRGLNWPSG FEQHRKKTGN LDLLDWLRAM FGFQRDNVRN  60
   61 QREHLVCLFA DNHIRLTPKP EPLNKLDDRA VDTVMSKLFK NYKNWCKFLG RKHSLRLPQA 120
  121 AQDIQQRKIL YMGLYLLIWG EAANIRFMPE CLCYIFHNMA YELHGLLAGN VSIVTGENIK 180
  181 PSYGGDDEAF LRKVITPIYR VVQTEANKNA NGKA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [412-549]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AHSDWSNYDD LNEYFWTPDC FSLGWPMRDD GDLFKSTRDT TQGKKGSFRK AGRTGKSNFT  60
   61 ETRTFWHIYH SFDRLWTFYL LALQAMIILA FERVELREIL RKDVLYALSS IFITAAFLRF 120
  121 LQSVLDVILN FPGFHRWK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [550-688]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FTDVLRNILK IVVSLAWCVV LPLCYAQSVS FAPGKLKQWL SFLPQVKGVP PLYIMAVALY  60
   61 LLPNVLAAIM FIFPMLRRWI ENSDWHIFRL LLWWSQPRIY VGRGMHESQI ALIKYTIFWL 120
  121 LLFCCKFAFS YFLQVKLLV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [689-908]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KPTNAIMSIR HVKYKWHEFF PNAEHNYGAV VSLWLPVILV YFMDTQIWYA IFSTICGGVI  60
   61 GAFDRLGEIR TLGMLRSRFQ SLPGAFNTYL VPSDKTRRRG FSLSKRFAEV TAARRTEAAK 120
  121 FSQLWNEIIS SFREEDLISD REMDLLLVPY TSDPSLKLIQ WPPFLLASKI PIALDMAAQF 180
  181 RTRDSDLWKR ICADEYMKCA VIECYESFKH VLHTLVIGEN 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [909-1008]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EKRIIGIIIK EVESNISKNS FLSNFRMAPL PALCSKFVEL VGILKNADPA KRDTVVLLLQ  60
   61 DMLEVVTRDM MQNENRELVE LGHTNKESGR QLFAGTDAKP 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.929 a.29.10 Description not found.

Predicted Domain #7
Region A:
Residues: [1009-1060]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AILFPPVATA QWHEQISRLH LLLTVKESAM DVPTNLEAQR RIAFFTNSLF MD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #8
Region A:
Residues: [1061-1145]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRAPRVRNM LSFSVLTPYY SEETVYSKND LEMENEDGVS VVYYLQKIFP DEWTNFLERL  60
   61 DCKDETSVLE SEENILQLRH WVSLR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #9
Region A:
Residues: [1146-1364]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GQTLFRTVRG MMYYRRALKL QAFLDMANET EILAGYKAIS EPTEEDKKSQ RSLYTQLEAV  60
   61 ADLKFTYVAT CQNYGNQKRS GDRRATDILN LMVNNPSLRV AYIDEVEERE GGKVQKVFYS 120
  121 VLIKAVDNLD QEIYRIKLPG PAKIGEGKPE NQNHALIFTR GEALQAIDMN QDHYLEEALK 180
  181 MRNLLEEFNE DHGVRAPTIL GFREHIFTGS VSSLAWFMS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #10
Region A:
Residues: [1365-1528]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NQETSFVTIG QRVLASPLKV RFHYGHPDVF DRIFHITRGG ISKASRGINL SEDIFAGFNS  60
   61 TLRRGNVTHH EYIQVGKGRD VGLNQISLFE AKVACGNGEQ TLSRDLYRLG HRFDFFRMMS 120
  121 CYFTTVGFYI SSMIVVLTVY AFLYGRLYLS LSGVEEAIVK FAAA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #11
Region A:
Residues: [1529-1570]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KGDSSLKAAM ASQSVVQLGL LMTLPMVMEI GLERGFRTAL SD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #12
Region A:
Residues: [1571-1818]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LIIMQLQLAP VFFTFSLGTK VHYYGRTILH GGSKYRATGR GFVVKHEKFA ENYRMYSRSH  60
   61 FVKGMELMVL LICYRIYGKA AEDSVGYALV MGSTWFLVGS WLFAPFFFNP SGFEWQKIVD 120
  121 DWDDWNKWIS SRGGIGVPAN KSWESWWEEE QEHLLHSGFF GKFWEIFLSL RYFIYQYGIV 180
  181 YQLNLTKESR MGKQHSIIVY GLSWLVIVAV MIVLKIVSMG RKKFSADFQL MFRLLKLFLF 240
  241 IGSVVIVG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #13
Region A:
Residues: [1819-1923]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFHFLKLTV GDIMQSLLAF LPTGWALLQI SQVARPLMKT VGMWGSVKAL ARGYEYIMGV  60
   61 VIFMPVTVLA WFPFVSEFQT RLLFNQAFSR GLQIQRILAG GKKQK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle