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View Structure Prediction Details

Protein: FLA16_ARATH
Organism: Arabidopsis thaliana
Length: 445 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FLA16_ARATH.

Description E-value Query
Range
Subject
Range
FLA15_ARATH - Fasciclin-like arabinogalactan protein 15 OS=Arabidopsis thaliana GN=FLA15 PE=2 SV=1
344.0 [0..18] [445..14]

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Predicted Domain #1
Region A:
Residues: [1-238]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSSYGATKF LLLLFLTTSI ATALPDNKPV PGQINSNSVL VALLDSHYTE LAELVEKALL  60
   61 LQTLEEAVGK HNITIFAPRN DALERNLDPL FKSFLLEPRN LKSLQSLLMF HILPKRITSP 120
  121 QWPSLSHHHR TLSNDHLHLT VDVNTLKVDS AEIIRPDDVI RPDGIIHGIE RLLIPRSVQE 180
  181 DFNRRRSLRS ISAVIPEGAP EVDPRTHRLK KPSPAVPAGA PPVLPIYDAM SPGPSLAP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.69897
Match: 1o70A
Description: Fasciclin I
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [239-445]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 APAPGPGGPR GHFNGDAQVK DFIHTLLHYG GYNEMADILV NLTSLATEMG RLVSEGYVLT  60
   61 VLAPNDEAMA KLTTDQLSEP GAPEQIMYYH IIPEYQTEES MYNAVRRFGK VKYDSLRFPH 120
  121 KVLAQEADGS VKFGHGDGSA YLFDPDIYTD GRISVQGIDG VLFPKEETPA TEIKPAAPVV 180
  181 KKVSKSRRGK LMEVACRMMG SRFIPCQ

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 4.35
Match: 1o70A
Description: Fasciclin I
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
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