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View Structure Prediction Details

Protein: FH18_ARATH
Organism: Arabidopsis thaliana
Length: 1111 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for FH18_ARATH.

Predicted Domain #1
Region A:
Residues: [1-304]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLEDEDYRVY VSRIMSQLRE QFPGASFMVF NFRDGDSRSR MESVLTEYDM TIMDYPRHYE  60
   61 GCPLLTMETV HHFLKSAESW LLLSQQNILL SHCELGGWPT LAFMLASLLL YRKQFSGEHR 120
  121 TLEMIYKQAP RELLQLMSPL NPLPSQLRFL QYISRRNVGS QWPPLDQALT LDCVNLRLIP 180
  181 DFDGEGGCRP IFRIYGQDPF MASDRTSKVL FSMPKRSKAV RQYKQADCEL VKIDINCHIL 240
  241 GDVVLECITL GSDLEREEMM FRVVFNTAFL RSNILTLNRG EIDVLWNTTD RFPKDFSAEV 300
  301 IFSE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 74.30103
Match: 1d5rA
Description: Pten tumor suppressor (Phoshphoinositide phosphatase), C-terminal domain; Phoshphoinositide phosphatase Pten (Pten tumor suppressor), N-terminal domain
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [305-682]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAGKKLASV DLPHMEEKDV LPMEAFAKVQ EIFSEAEWLD PNSDVAVTVF NQITAANILQ  60
   61 ESLDSGSPRS PDSRSLLESA LEKVKEKTKL MISENIVSSP DTSSPEKEKD TMSSHKSYAD 120
  121 PNSILKKVDE SRGLRVSVQR NVHSKIFSPR MVQSPVTSPL PNRSPTQGSP ASISRFHSSP 180
  181 SSLGITSILH DHGSCKDEES TSSSPASPSI SFLPTLHPLT SSQPKKASPQ CPQSPTPVHS 240
  241 NGPPSAEAAV TSSPLPPLKP LRILSRPPPP PPPPPISSLR STPSPSSTSN SIATQGPPPP 300
  301 PPPPPLQSHR SALSSSPLPP PLPPKKLLAT TNPPPPPPPP LHSNSRMGAP TSSLVLKSPP 360
  361 VPPPPAPAPL SRSHNGNI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.39794
Match: 1y0fB
Description: No description for 1y0fB was found.

Predicted Domain #3
Region A:
Residues: [683-1111]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PPVPGPPLGL KGRGILQNLK GQGQTRKANL KPYHWLKLTR AVQGSLWAEA QKSDEAATAP  60
   61 DFDISELEKL FSAVNLSSDS ENNGGKSGRR ARPKVEKVQL IELRRAYNCE IMLSKVKIPL 120
  121 PDLMSSVLAL DESVIDVDQV DNLIKFCPTK EEAELLKGFT GNKETLGRCE QFFLELLKVP 180
  181 RVETKLRVFS FKIQFHSQVT DLRRGLNTIH SAANEVRGSA KLKRIMQTIL SLGNALNHGT 240
  241 ARGSAIGFRL DSLLKLTDTR SRNSKMTLMH YLCKVLAEKL PELLNFPKDL VSLEAATKIQ 300
  301 LKYLAEEMQA ISKGLEKVVQ EFTASETDGQ ISKHFRMNLK EFLSVAEGEV RSLASLYSTV 360
  361 GGSADALALY FGEDPARVPF EQVVSTLQNF VRIFVRSHEE NCKQVEFEKK RAQKEAENEK 420
  421 LKKGVYNEN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 90.045757
Match: 2j1dG
Description: No description for 2j1dG was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle