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View Structure Prediction Details

Protein: ALE2_ARATH
Organism: Arabidopsis thaliana
Length: 744 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ALE2_ARATH.

Description E-value Query
Range
Subject
Range
gi|25287641, gi|... - gi|4512705|gb|AAD21758.1| putative protein kinase [Arabidopsis thaliana], pir||E84587 probable prote...
385.0 [0..335] [744..26]

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Predicted Domain #1
Region A:
Residues: [1-283]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNFAMLLLL ILLLHSLASF PICFARLFPM SLPFTRSKAH QMHFFHPYLN PSVAPTPSPA  60
   61 FSPNPSRIPP LRHKGHHRHR RWHLRRNATA VSPSSHDCQQ TCVEPLTSTP FGSPCGCVFP 120
  121 MKVQLLLSVA PFSIFPVTNE LEIEVAAGTY LEQSQVKIMG ASADSENQGK TVVDINLVPL 180
  181 GEKFDNTTAT LIYQRFRHKK VPLNETVFGD YEVTHISYPG IPSSSPNGDV TGDAPGGLPI 240
  241 PINATTFANK SQGIGFRTIA IIALSGFVLI LVLVGAISII VKW

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 18.39794
Match: 1ogqA
Description: Polygalacturonase inhibiting protein PGIP
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [284-631]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KKIGKSSNAV GPALAPSINK RPGAGSMFSS SARSSGSDSL MSSMATCALS VKTFTLSELE  60
   61 KATDRFSAKR VLGEGGFGRV YQGSMEDGTE VAVKLLTRDN QNRDREFIAE VEMLSRLHHR 120
  121 NLVKLIGICI EGRTRCLIYE LVHNGSVESH LHEGTLDWDA RLKIALGAAR GLAYLHEDSN 180
  181 PRVIHRDFKA SNVLLEDDFT PKVSDFGLAR EATEGSQHIS TRVMGTFGYV APEYAMTGHL 240
  241 LVKSDVYSYG VVLLELLTGR RPVDMSQPSG EENLVTWARP LLANREGLEQ LVDPALAGTY 300
  301 NFDDMAKVAA IASMCVHQEV SHRPFMGEVV QALKLIYNDA DETCGDYC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 69.045757
Match: 2qkwB
Description: No description for 2qkwB was found.

Predicted Domain #3
Region A:
Residues: [632-744]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SQKDSSVPDS ADFKGDLAPS DSSWWNLTPR LRYGQASSFI TMDYSSGPLE DMENRPHSAS  60
   61 SIPRVGGLIL PNRSGPLRPM RSRRNFFRLR GSMSEHGGPS SSRHLWSGNG DWL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.69897
Match: 2eaoA
Description: No description for 2eaoA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle