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View Structure Prediction Details

Protein: gi|34873545
Organism: Cloning vector pRFN4
Length: 361 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|34873545.

Description E-value Query
Range
Subject
Range
gi|77638394, gi|... - gi|77685795|ref|ZP_00801179.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase, C...
370.0 [0..1] [360..1]

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Predicted Domain #1
Region A:
Residues: [1-361]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEYYMKLAL DLAKQGEGQT ESNPLVGAVV VKDGQIVGMG AHLKYGEAHA EVHAIHMAGA  60
   61 HAEGADIYVT LEPCSHYGKT PPCAELIINS GIKRVFVAMR DPNPLVAGRG ISMMKEAGIE 120
  121 VREGILADQA ERLNEKFLHF MRTGLPYVTL KAAASLDGKI ATSTGDSKWI TSEAARQDAQ 180
  181 QYRKTHQSIL VGVGTVKADN PSLTCRLPNV TKQPVRVILD TVLSIPEDAK VICDQIAPTW 240
  241 IFTTARADEE KKKRLSAFGV NIFTLETERI QIPDVLKILA EEGIMSVYVE GGSAVHGSFV 300
  301 KEGCFQEIIF YFAPKLIGGT HAPSLISGEG FQSMKDVPLL QFTDITQIGR DIKLTAKPTK 360
  361 E

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 102.0
Match: 2b3zA
Description: Crystal structure of a bifunctional deaminase and reductase involved in riboflavin biosynthesis
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle