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View Structure Prediction Details

Protein: gi|1075619
Organism: Synechocystis sp.
Length: 362 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|1075619.

Description E-value Query
Range		 Subject
Range
AROC_MANSM - Chorismate synthase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=aroC PE=3 SV=1
 606.0 [0..2] [360..3]
gi|25292293 - pir||AC1906 chorismate synthase [imported] - Nostoc sp. (strain PCC 7120)
AROC_ANAVT - Chorismate synthase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=aroC PE=3 SV=1
AROC_NOSS1 - Chorismate synthase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=aroC PE=3 SV=1
 600.0 [0..1] [362..1]
gi|37680618, gi|... - gi|37680618|ref|NP_935227.1| chorismate synthase [Vibrio vulnificus YJ016], gi|37199366|dbj|BAC95198...
 600.0 [0..2] [358..19]
AROC_VIBVU - Chorismate synthase OS=Vibrio vulnificus (strain CMCP6) GN=aroC PE=3 SV=1
AROC_VIBVU - Chorismate synthase OS=Vibrio vulnificus GN=aroC PE=3 SV=1
 598.0 [0..2] [358..3]
gi|497783 - gi|497783|gb|AAA21830.1| 2,3-dihydroxybenzoic acid [Listonella anguillarum]
 597.0 [0..2] [358..14]
AROC_VIBPA - Chorismate synthase OS=Vibrio parahaemolyticus GN=aroC PE=3 SV=1
AROC_VIBPA - Chorismate synthase OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) GN=aroC PE=3 SV=...
 597.0 [0..2] [358..3]
AROC_HAHCH - Chorismate synthase OS=Hahella chejuensis (strain KCTC 2396) GN=aroC PE=3 SV=1
 596.0 [0..2] [358..3]
AROC_NOSP7 - Chorismate synthase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=aroC PE=3 SV=1
 594.0 [0..1] [362..1]

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Predicted Domain #1
Region A:
Residues: [1-362] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNTFGSLFR ITTFGESHGG GVGVIIDGCP PRLEISPEEI QVDLDRRRPG QSKITTPRKE  60
   61 ADQCEILSGV FEGKTLGTPI AILVRNKDAR SQDYNEMAVK YRPSHADATY EAKYGIRNWQ 120
  121 GGGRSSARET IGRVAAGAIA KKILAQFNGV EIVAYVKSIQ DIEATVDSNT VTLEQVESNI 180
  181 VRCPDEECAE KMIERIDQVL RQKDSIGGVV ECAIRNAPKG LGEPVFDKLE ADLAKAMMSL 240
  241 PATKGFEFGS GFAGTLLTGS QHNDEYYLDE AGEWRTRTNR SGGVQGGISN GEPIIMRIAF 300
  301 KPTATIGQEQ KTVSNIGEET TLAAKGRHDP CVLPRAVPMV EAMAALVLCD HLLRFQAQCK 360
  361 TL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 154.0
Match: 1r52A
Description: Crystal structure of the bifunctional chorismate synthase from Saccharomyces cerevisiae
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
chorismate synthase activity 5.15976990017342 bayes_pls_golite062009
carbon-oxygen lyase activity, acting on phosphates 4.26558071446785 bayes_pls_golite062009
catalytic activity 1.94308403509017 bayes_pls_golite062009
carbon-oxygen lyase activity 1.59965915025616 bayes_pls_golite062009
lyase activity 1.53765291169529 bayes_pls_golite062009
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle