YRC Public Data Repository - Protein Structure Prediction

Protein:	GPH1_PSEAE
Organism:	Pseudomonas aeruginosa PAO1
Length:	272 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GPH1_PSEAE.

Description	E-value	Query Range	Subject Range
gi\|49083652 - gi\|49083652\|gb\|AAT51088.1\| PA0608 [synthetic construct]	2.0E-55	[1..272]	[1..272]
gi\|84318851, gi\|... - gi\|84318851\|ref\|ZP_00967268.1\| COG0546: Predicted phosphatases [Pseudomonas aeruginosa C3719], gi\|25... gi\|116054336, gi... - gi\|32043802\|ref\|ZP_00141064.1\| COG0546: Predicted phosphatases [Pseudomonas aeruginosa UCBPP-PA14], ... gi\|107099594 - gi\|107099594\|ref\|ZP_01363512.1\| hypothetical protein PaerPA_01000607 [Pseudomonas aeruginosa PACS2] gi\|218889349, gi... - gi\|218889349\|ref\|YP_002438213.1\| phosphoglycolate phosphatase [Pseudomonas aeruginosa LESB58], gi\|21...	3.0E-55	[1..272]	[1..272]
gi\|152986126, gi... - gi\|94413329\|ref\|ZP_01293215.1\| hypothetical protein PaerP_01004840 [Pseudomonas aeruginosa PA7], gi\|...	2.0E-54	[1..272]	[1..272]
GPH_PSEPF - Phosphoglycolate phosphatase OS=Pseudomonas fluorescens (strain Pf0-1) GN=Pfl01_5119 PE=3 SV=1	3.0E-52	[1..272]	[1..272]
GPH_PSEU2 - Phosphoglycolate phosphatase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=Psyr_4610 PE=3 S...	3.0E-51	[1..272]	[1..272]
GPH_PSE14 - Phosphoglycolate phosphatase OS=Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6) GN=P...	3.0E-51	[1..272]	[1..272]
GPH_PSESM - Phosphoglycolate phosphatase OS=Pseudomonas syringae pv. tomato (strain DC3000) GN=PSPTO_0567 PE=3 S... GPH_PSESM - Phosphoglycolate phosphatase OS=Pseudomonas syringae pv. tomato GN=PSPTO_0567 PE=3 SV=2	3.0E-51	[1..272]	[1..272]
gi\|95108703, gi\|... - gi\|95108703\|emb\|CAK13397.1\| phosphoglycolate phosphatase [Pseudomonas entomophila L48], gi\|104779716... gi\|95108703 - gi\|95108703\|emb\|CAK13397.1\| phosphoglycolate phosphatase [Pseudomonas entomophila L48]	5.0E-51	[1..272]	[1..272]
GPH_PSEPK - Phosphoglycolate phosphatase OS=Pseudomonas putida (strain KT2440) GN=PP_0416 PE=3 SV=1	2.0E-50	[1..272]	[1..272]
tr\|I7AZ59\|I7AZ59... - Phosphoglycolate phosphatase OS=Pseudomonas putida (strain DOT-T1E) GN=gph PE=3 SV=1 gi\|82739492, gi\|... - gi\|82739492\|ref\|ZP_00902293.1\| 2-phosphoglycolate phosphatase, prokaryotic:HAD-superfamily hydrolase...	2.0E-50	[1..272]	[1..272]

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Predicted Domain #1

Region A:
Residues: [1-272]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAAEPFFAT RLPRLVMFDL DGTLVDSVPD LTAAVDSMLA SFGRPPAGIE KVRQWIGNGA  60
   61 RVLVRRALAG SIEHDGIGEE ETEAALALFM EAYADSHALT EVYPGVVDTL KWLKRNGVEM 120
  121 ALITNKPERF VAPLLDEMKL GRYFRWIIGG DTLPQQKPDP AALLFVMKMA GIEPEDALFV 180
  181 GDSRNDVLAA KAAGVRCAAL TYGYNHGRPI AEEAPTLVID NLRDLLPCAD QAAEIVLPDD 240
  241 SLSPSDQRDQ AVAVSKLWMK VIKALARWRW RA

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	43.69897
Match:	2hszA
Description:	No description for 2hszA was found.

Predicted functions:

Term	Confidence	Notes
phosphatase activity	4.95181073884363	bayes_pls_golite062009
phosphoric ester hydrolase activity	4.77239634899576	bayes_pls_golite062009
hydrolase activity	4.28050357117094	bayes_pls_golite062009
hydrolase activity, acting on ester bonds	4.03655952210286	bayes_pls_golite062009
phosphoprotein phosphatase activity	2.04527248780903	bayes_pls_golite062009
catalytic activity	1.92340854382984	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: