YRC Public Data Repository - Protein Structure Prediction

Protein:	PSTB_ECOLI
Organism:	Escherichia coli
Length:	257 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PSTB_ECOLI.

Description	E-value	Query Range	Subject Range
PSTB_SALTY - Phosphate import ATP-binding protein pstB OS=Salmonella typhimurium GN=pstB PE=3 SV=2 PSTB_SALTI - Phosphate import ATP-binding protein PstB OS=Salmonella typhi GN=pstB PE=3 SV=2 PSTB_SALTI - Phosphate import ATP-binding protein pstB OS=Salmonella typhi GN=pstB PE=3 SV=2 gi\|16762475 - gi\|16762475\|ref\|NP_458092.1\| phosphate transporter subunit [Salmonella enterica subsp. enterica sero... PSTB_SALPA - Phosphate import ATP-binding protein PstB OS=Salmonella paratyphi A (strain ATCC 9150 / SARB42) GN=p... PSTB_SALTY - Phosphate import ATP-binding protein PstB OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 70... gi\|29139599, gi\|... - gi\|29143963\|ref\|NP_807305.1\| phosphate transporter subunit [Salmonella enterica subsp. enterica sero... PSTB_SALTY - Phosphate import ATP-binding protein PstB OS=Salmonella typhimurium GN=pstB PE=3 SV=2 lcl\|NC_016856.1_... - [gene=pstB] [protein=phosphate transporter subunit] [protein_id=YP_005240121.1] [location=complement... gi\|207859077, gi... - gi\|207859077\|ref\|YP_002245728.1\| phosphate transporter subunit [Salmonella enterica subsp. enterica ... gi\|205354562, gi... - gi\|205354562\|ref\|YP_002228363.1\| phosphate transporter subunit [Salmonella enterica subsp. enterica ... gi\|204928841, gi... - gi\|204928841\|ref\|ZP_03220040.1\| phosphate ABC transporter, ATP-binding protein [Salmonella enterica ... PSTB_SALPA - Phosphate import ATP-binding protein PstB OS=Salmonella paratyphi A GN=pstB PE=3 SV=1 gi\|197096129, gi... - gi\|197364652\|ref\|YP_002144289.1\| phosphate transporter subunit [Salmonella enterica subsp. enterica ...	315.0	[0..1]	[257..1]
PSTB_CHRVO - Phosphate import ATP-binding protein PstB OS=Chromobacterium violaceum GN=pstB PE=3 SV=1 PSTB_CHRVO - Phosphate import ATP-binding protein PstB OS=Chromobacterium violaceum (strain ATCC 12472 / DSM 3019...	314.0	[0..1]	[257..1]
PSTB_ENTCL - Phosphate import ATP-binding protein PstB OS=Enterobacter cloacae GN=pstB PE=3 SV=1	313.0	[0..1]	[257..1]
PSTB_SALCH - Phosphate import ATP-binding protein PstB OS=Salmonella choleraesuis GN=pstB PE=3 SV=1 PSTB_SALCH - Phosphate import ATP-binding protein PstB OS=Salmonella choleraesuis (strain SC-B67) GN=pstB PE=3 SV... PSTB_SALCH - Phosphate import ATP-binding protein pstB OS=Salmonella choleraesuis GN=pstB PE=3 SV=1	312.0	[0..1]	[257..1]
PSTB_CARHZ - Phosphate import ATP-binding protein PstB OS=Carboxydothermus hydrogenoformans (strain ATCC BAA-161 ...	310.0	[0..7]	[257..3]
PSTB_METJA - Phosphate import ATP-binding protein PstB OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM ... PSTB_METJA - Phosphate import ATP-binding protein pstB OS=Methanocaldococcus jannaschii GN=pstB PE=3 SV=1	308.0	[0..7]	[257..2]
gi\|77958178 - gi\|77958178\|ref\|ZP_00822216.1\| COG1117: ABC-type phosphate transport system, ATPase component [Yersi...	307.0	[0..1]	[257..1]
gi\|77961809 - gi\|77961809\|ref\|ZP_00825639.1\| COG1117: ABC-type phosphate transport system, ATPase component [Yersi...	307.0	[0..1]	[257..1]
PSTB_EDWTA - Phosphate import ATP-binding protein PstB OS=Edwardsiella tarda GN=pstB PE=3 SV=1	307.0	[0..1]	[257..1]
gi\|229839822, gi... - gi\|229839822\|ref\|ZP_04459981.1\| phosphate transporter subunit; ATP-binding component of ABC superfam... gi\|229691246, gi... - gi\|229841907\|ref\|ZP_04462063.1\| phosphate transporter subunit; ATP-binding component of ABC superfam... gi\|229700222, gi... - gi\|229896784\|ref\|ZP_04511947.1\| phosphate transporter subunit; ATP-binding component of ABC superfam... PSTB2_YERPA - Phosphate import ATP-binding protein PstB 2 OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=pstB2... PSTB2_YERPN - Phosphate import ATP-binding protein PstB 2 OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=pstB... gi\|150260952, gi... - gi\|150260952\|ref\|ZP_01917680.1\| putative phosphate transport ATP-binding protein [Yersinia pestis CA... gi\|170026438, gi... - gi\|170026438\|ref\|YP_001722943.1\| phosphate transporter subunit [Yersinia pseudotuberculosis YPIII], ... gi\|145212855, gi... - gi\|145601159\|ref\|YP_001165235.1\| phosphate transporter subunit [Yersinia pestis Pestoides F], gi\|145... gi\|167468123 - gi\|167468123\|ref\|ZP_02332827.1\| phosphate ABC transporter, ATP-binding protein [Yersinia pestis FV-1... gi\|186897477, gi... - gi\|186897477\|ref\|YP_001874589.1\| phosphate transporter subunit [Yersinia pseudotuberculosis PB1/+], ... gi\|15982003, gi\|... - gi\|218931090\|ref\|YP_002348965.1\| phosphate transporter subunit [Yersinia pestis CO92], gi\|16124222\|r... PSTB2_YERPS - Phosphate import ATP-binding protein PstB 2 OS=Yersinia pseudotuberculosis serotype I (strain IP3295... PSTB2_YERPS - Phosphate import ATP-binding protein PstB 2 OS=Yersinia pseudotuberculosis GN=pstB2 PE=3 SV=1 gi\|166009495, gi... - gi\|166009495\|ref\|ZP_02230393.1\| phosphate ABC transporter, ATP-binding protein [Yersinia pestis biov... gi\|167401641, gi... - gi\|167401641\|ref\|ZP_02307135.1\| phosphate ABC transporter, ATP-binding protein [Yersinia pestis biov... gi\|166213339, gi... - gi\|166213339\|ref\|ZP_02239374.1\| phosphate ABC transporter, ATP-binding protein [Yersinia pestis biov... PSTB2_YERPE - Phosphate import ATP-binding protein PstB 2 OS=Yersinia pestis GN=pstB2 PE=3 SV=1 gi\|167425425, gi... - gi\|167425425\|ref\|ZP_02317178.1\| phosphate ABC transporter, ATP-binding protein [Yersinia pestis biov... gi\|167422836, gi... - gi\|167422836\|ref\|ZP_02314589.1\| phosphate ABC transporter, ATP-binding protein [Yersinia pestis biov... gi\|162353678, gi... - gi\|77634102\|ref\|ZP_00796210.1\| COG1117: ABC-type phosphate transport system, ATPase component [Yersi... gi\|153950124, gi... - gi\|77630945\|ref\|ZP_00793531.1\| COG1117: ABC-type phosphate transport system, ATPase component [Yersi... gi\|89104501, gi\|... - gi\|89104501\|ref\|ZP_01177042.1\| COG1117: ABC-type phosphate transport system, ATPase component [Yersi...	307.0	[0..1]	[257..1]

Back

Predicted Domain #1

Region A:
Residues: [1-257]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMVETAPSK IQVRNLNFYY GKFHALKNIN LDIAKNQVTA FIGPSGCGKS TLLRTFNKMF  60
   61 ELYPEQRAEG EILLDGDNIL TNSQDIALLR AKVGMVFQKP TPFPMSIYDN IAFGVRLFEK 120
  121 LSRADMDERV QWALTKAALW NETKDKLHQS GYSLSGGQQQ RLCIARGIAI RPEVLLLDEP 180
  181 CSALDPISTG RIEELITELK QDYTVVIVTH NMQQAARCSD HTAFMYLGEL IEFSNTDDLF 240
  241 TKPAKKQTED YITGRYG

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	68.045757
Match:	1z47A
Description:	Structure of the ATPase subunit CysA of the putative sulfate ATP-binding cassette (ABC) transporter from Alicyclobacillus acidocaldarius
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits