YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: FBX8_ARATH
Organism: Arabidopsis thaliana
Length: 295 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBX8_ARATH.

Description E-value Query
Range
Subject
Range
gi|20197464 - gi|20197464|gb|AAD24614.2| F-box protein family, AtFBX8 [Arabidopsis thaliana]
145.0 [0..1] [264..1]

Back

Predicted Domain #1
Region A:
Residues: [1-295]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFSFLLATV QKERMKRRSR TRSRSRRRAK QDPKTWVARY IPQDLLIEIL TRLPPKSVMR  60
   61 FKCVSKFWSS LLSSRYFCNR FLIVPSQPQP SLYMCLLDRY NYSKSLILSS APSTSPYSFV 120
  121 FDQDLTIRKM GGFFLRILRG FIFFTRNLKA RIYNPTTRQL VILPTIKESD IIAGPPYNIL 180
  181 YFICHDPVND RYKLLCTVSY ASDNDLQNLK SELWIFVLEA GGSWKRVANE FPHHVPSHLD 240
  241 LNMNGVLYFL AWTDPHTCML VSFDVRSEEF NTMQVPRNAG DTLPRQEKGV VNRVW

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.30103
Match: 1p22A
Description: F-box/WD-repeat protein 1 (beta-TRCP1)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle