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View Structure Prediction Details

Protein: TPD1_ARATH
Organism: Arabidopsis thaliana
Length: 176 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TPD1_ARATH.

Description E-value Query
Range
Subject
Range
gi|125531411 - gi|125531411|gb|EAY77976.1| hypothetical protein OsI_031935 [Oryza sativa (indica cultivar-group)]
gi|125574331, gi... - gi|78708063|gb|ABB47038.1| hypothetical protein LOC_Os10g14020 [Oryza sativa (japonica cultivar-grou...
217.0 [0..5] [175..8]

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Predicted Domain #1
Region A:
Residues: [1-176]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRRRLLVSA TLLSYLLYGM ALVSVEASGG EKLRDNLDLT KTTTSSPSIS HRKMLLLSPG  60
   61 TGKTERSVEP ERIGEKCKST DIVVNQAVTE PMPNGIPGYM VEITNQCMSG CIISRIHINC 120
  121 GWFSSAKLIN PRVFKRIHYD DCLVNNGKPL PFGSTLSFHY ANTFPYHLSV AFVTCA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle