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View Structure Prediction Details

Protein: P24D3_ARATH
Organism: Arabidopsis thaliana
Length: 217 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for P24D3_ARATH.

Description E-value Query
Range
Subject
Range
gi|109066641, gi... - gi|109066643|ref|XP_001091631.1| PREDICTED: similar to transmembrane emp24 protein transport domain ...
240.0 [0..17] [217..16]

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Predicted Domain #1
Region A:
Residues: [1-142]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMTAKMRRE FPTAFLLLFL VPVMIPVGEA VWLDVPPTGT KCVSEEIQSN VVVLADYLII  60
   61 SEDHEVMPTI SVKVTSPYGN NLHNMENVTH GQFAFTTQES GNYLACFWAD EKSHGNKNVS 120
  121 INIDWRTGIA AKDWASIAKK EK

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 10.958607
Match: PF01105.15
Description: No description for PF01105.15 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [143-217]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IEGVELEIRK LEGAVEAIHE NILYLRNREA DMRTMSEKTN SRVAWYSIMS LGVCIAVSGF  60
   61 QVLYLKQYFE KKKLI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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