YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: sax-1
Organism: Caenorhabditis elegans
Length: 476 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sax-1.

Description E-value Query
Range
Subject
Range
CE31052 - WBGene00004727 locus:sax-1 protein kinase status:Confirmed TR:Q9NB00 protein_id:AAK82913.2
415.0 [0..9] [476..2]

Back

Predicted Domain #1
Region A:
Residues: [1-476]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEIAPEMEI SQYTKDKASC TRISIESYYS KRVTQCAERE NRLKKLEEDI SARGLSDEEK  60
   61 EEKRKIHHSK ETDYLRLKRT RLTVNDFESL KVIGRGAFGE VRLVQKHDTG HIYAMKILRK 120
  121 SEMVEKEQTA HVRAERDILS EADCDWVVKM YYSFQDYSNL YLVMEFLPGG DMMTLLIKKD 180
  181 TLTEEATQFY IAEAALAIQF IHSLGFIHRD IKPDNLLLDA RGHVKLSDFG LCTGLKKFHR 240
  241 TDHYRNWPST LPPDFISKPF ESKRKAETWK RNRRAYAYST VGTPDYIAPE VFQPNGYTKS 300
  301 CDWWSLGVIM YEMLIGYPPF CSELPQETYR KVINWQQTLV FPSDVPISIE AKATIKRFCC 360
  361 EAERRLGNHG GLDEIKQCPF VKRIDWNHIR ERPPPIRVTV KSIDDTSNFD DFPDEDLTWP 420
  421 TSTLIRPEEQ PGRRGEFVDF TYKRFDGLTQ KMRYSDLKKF QQAKKNKKGG QQGTSD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 79.0
Match: 2f2uA
Description: No description for 2f2uA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle