YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|23509675, gi\|...
Organism:	Plasmodium falciparum 3D7
Length:	342 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|23509675, gi|....

Description	E-value	Query Range	Subject Range
gi\|56497508 - gi\|56497508\|emb\|CAH97507.1\| conserved hypothetical protein [Plasmodium berghei] gi\|68070981 - gi\|68070981\|ref\|XP_677404.1\| hypothetical protein [Plasmodium berghei strain ANKA]	271.0	[0..1]	[342..1]
gi\|82704478 - gi\|82704478\|ref\|XP_726572.1\| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL] gi\|23482034 - gi\|23482034\|gb\|EAA18137.1\| hypothetical protein [Plasmodium yoelii yoelii]	235.0	[0..55]	[342..1]
gi\|56523789 - gi\|56523789\|emb\|CAH74567.1\| conserved hypothetical protein [Plasmodium chabaudi chabaudi] gi\|70949164 - gi\|70949164\|ref\|XP_744018.1\| hypothetical protein [Plasmodium chabaudi chabaudi]	220.0	[0..69]	[342..1]
gi\|66362652 - gi\|66362652\|ref\|XP_628292.1\| apicomplexan conserved protein with 2 or more transmembrane domains [Cr... gi\|46229760 - gi\|46229760\|gb\|EAK90578.1\| apicomplexan conserved protein with 2 or more transmembrane domains [Cryp...	202.0	[0..1]	[340..1]
LPCT2_ARATH - Lysophospholipid acyltransferase LPEAT2 OS=Arabidopsis thaliana GN=LPEAT2 PE=1 SV=1	193.0	[0..12]	[332..72]
gi\|169749448, gi... - gi\|170022914\|ref\|YP_001719419.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Yersinia pseudotube... gi\|167469329 - gi\|167469329\|ref\|ZP_02334033.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Yersinia pestis FV-1... gi\|166962801, gi... - gi\|167418807\|ref\|ZP_02310560.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Yersinia pestis biov... gi\|167398515, gi... - gi\|167398515\|ref\|ZP_02304039.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Yersinia pestis biov... gi\|186699856, gi... - gi\|186896830\|ref\|YP_001873942.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Yersinia pseudotube... gi\|162421401, gi... - gi\|162421401\|ref\|YP_001604892.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Yersinia pestis Ang... gi\|166211993, gi... - gi\|166211993\|ref\|ZP_02238028.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Yersinia pestis biov... gi\|229705478, gi... - gi\|229837355\|ref\|ZP_04457518.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Yersinia pestis Pest... gi\|229682232, gi... - gi\|229900893\|ref\|ZP_04516017.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Yersinia pestis Nepa... gi\|166008748, gi... - gi\|166008748\|ref\|ZP_02229646.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Yersinia pestis biov... gi\|108809110, gi... - gi\|108809110\|ref\|YP_653026.1\| putative acyltransferase [Yersinia pestis Antiqua], gi\|108781023\|gb\|AB... gi\|165939859, gi... - gi\|165939859\|ref\|ZP_02228398.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Yersinia pestis biov... gi\|229690152, gi... - gi\|229842885\|ref\|ZP_04463037.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Yersinia pestis biov... gi\|165923174, gi... - gi\|165924974\|ref\|ZP_02220806.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Yersinia pestis biov... gi\|229696932, gi... - gi\|229840566\|ref\|ZP_04460725.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Yersinia pestis biov... gi\|25346998 - pir\|\|AC0083 1-acylglycerol-3-phosphate O-acyltransferase (EC 2.3.1.51) [imported] - Yersinia pestis ... gi\|51597689, gi\|... - gi\|51597689\|ref\|YP_071880.1\| putative acyltransferase (LPAAT) [Yersinia pseudotuberculosis IP 32953]... gi\|45437617, gi\|... - gi\|45442751\|ref\|NP_994290.1\| putative acyltransferase [Yersinia pestis biovar Microtus str. 91001], ... Q665W9\|Q665W9_YERPS - Putative acyltransferase (LPAAT) precursor - Yersinia pseudotuberculosis gi\|16120997, gi\|... - gi\|218927865\|ref\|YP_002345740.1\| putative acyltransferase [Yersinia pestis CO92], gi\|16120997\|ref\|NP... gi\|153947585, gi... - gi\|153947585\|ref\|YP_001399575.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Yersinia pseudotube... gi\|149289704, gi... - gi\|150260296\|ref\|ZP_01917024.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Yersinia pestis CA88... gi\|145597765, gi... - gi\|145597765\|ref\|YP_001161841.1\| acyltransferase [Yersinia pestis Pestoides F], gi\|145209461\|gb\|ABP3...	172.0	[0..39]	[308..1]
gi\|167425098, gi... - gi\|167425098\|ref\|ZP_02316851.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Yersinia pestis biov... gi\|21960466, gi\|... - gi\|22127380\|ref\|NP_670803.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Yersinia pestis KIM], g...	170.0	[0..39]	[308..1]
gi\|77959539, gi\|... - gi\|77959539\|ref\|ZP_00823558.1\| COG0204: 1-acyl-sn-glycerol-3-phosphate acyltransferase [Yersinia ber...	170.0	[0..39]	[308..1]
gi\|113460644, gi... - gi\|23468006\|ref\|ZP_00123580.1\| COG0204: 1-acyl-sn-glycerol-3-phosphate acyltransferase [Haemophilus ...	169.0	[0..39]	[310..1]

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Predicted Domain #1

Region A:
Residues: [1-342]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKYREFADA STGINPFLPV WVNKKLSFQE KLLKLLLFPI VVMRLCFLSL TLIFMFFLNS  60
   61 LLKILIFQCI KDFFYQIIQT IYCRLLLFYL GFLYLDEQYA NNKRVKIKCT KQKIPFTYDT 120
  121 YGHIFLSNFT SFVDILYLSF RLNPLFIVIN KNGSLSPVCF YDLIKLSLKF SIPNKMGIFK 180
  181 NIEQIHNYAR THKIKNVVIF PEAMKSNGSC ILLWKNDIFQ NSDLVLRNKC NIITFIYDEI 240
  241 NIINKKLNHF YTSPHTVFHP FIHITFLCFN IYNKIKIVWI SEKDISQAIK EQSFKNNDEF 300
  301 VYYLRNIMGQ MKPTGGTLVN VKSEMLEKFV NYWNMTRKKA YL

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	2.77
Match:	1k30A
Description:	Glycerol-3-phosphate (1)-acyltransferase
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits