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View Structure Prediction Details

Protein: tr|A0A0A0MQ24|A0...
Organism: Felis catus
Length: 264 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tr|A0A0A0MQ24|A0....

Description E-value Query
Range
Subject
Range
RS3A_MOUSE - 40S ribosomal protein S3a OS=Mus musculus GN=Rps3a PE=1 SV=3
gi|51980539 - gb|AAH82142.1| Unknown (protein for MGC:98352) [Xenopus laevis]
433.0 [0..1] [264..1]
RS3A_MACFA - 40S ribosomal protein S3a OS=Macaca fascicularis GN=RPS3A PE=2 SV=3
433.0 [0..1] [264..1]
gi|76703555, gi|... - gi|76703557|ref|XP_876951.1| PREDICTED: similar to ribosomal protein S3a isoform 4 [Bos taurus], gi|...
432.0 [0..1] [264..1]
RS3A_RAT - 40S ribosomal protein S3a OS=Rattus norvegicus GN=Rps3a PE=1 SV=2
tr|G3HKG8|G3HKG8... - 40S ribosomal protein S3a OS=Cricetulus griseus GN=Rps3a PE=3 SV=1
431.0 [0..1] [264..1]
gi|306553 - gi|306553|gb|AAA35682.1| ribosmal protein small subunit
431.0 [0..1] [264..1]
gi|57106406 - gi|57106406|ref|XP_534831.1| PREDICTED: similar to ribosomal protein S3a isoform 1 [Canis familiaris...
430.0 [0..1] [264..1]

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Predicted Domain #1
Region A:
Residues: [1-77]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVGKNKRLT KGGKKGAKKK VVDPFSKKDW YDVKAPAMFN IRNIGKTLVT RTQGTKIASD  60
   61 GLKGRVFEVS LADLQND

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [78-200]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EVAFRKFKLI TEDVQGKNCL TNFHGMDLTR DKMCSMVKKW QTMIEAHVDV KTTDGYLLRL  60
   61 FCVGFTKKRN NQIRKTSYAQ HQQVRQIRKK MMEIMTREVQ TNDLKEVVNK LIPDSIGKDI 120
  121 EKA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.944 N/A N/A a.133.1 Phospholipase A2, PLA2
View Download 0.944 N/A N/A a.133.1 Phospholipase A2, PLA2
View Download 0.765 N/A N/A d.240.1 Description not found.
View Download 0.655 N/A N/A d.109.1 Actin depolymerizing proteins
View Download 0.641 N/A N/A a.216.1 Description not found.
View Download 0.640 N/A N/A d.109.1 Actin depolymerizing proteins
View Download 0.637 N/A N/A d.109.1 Actin depolymerizing proteins
View Download 0.593 N/A N/A d.109.1 Actin depolymerizing proteins
View Download 0.587 N/A N/A d.109.1 Actin depolymerizing proteins

Predicted Domain #3
Region A:
Residues: [201-264]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CQSIYPLHDV FVRKVKMLKK PKFELGKLME LHGEGSSSGK ATGDETGAKV ERADGYEPPV  60
   61 QESV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.735 N/A N/A a.56.1 CO dehydrogenase ISP C-domain like
View Download 0.620 N/A N/A a.56.1 CO dehydrogenase ISP C-domain like
View Download 0.442 N/A N/A d.42.1 POZ domain
View Download 0.385 N/A N/A a.8.9 Description not found.
View Download 0.306 N/A N/A a.139.1 Type I dockerin domain
View Download 0.297 N/A N/A a.179.1 Replisome organizer (g39p helicase loader/inhibitor protein)


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle